GT2848

CSHL Arabidopsis genetrap mutant lines

Original: GT2848

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT2848

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 12188875 [Map]; Strand: w
      • AT4G23310.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 23
        Distance: 112; Region: intergenic
      • AT4G23320.1 - [+] show detail - cysteine-rich RLK (RECEPTOR-like protein kinase) 24
        Distance: 307; Region: intergenic
    Flanking Genome Sequence: GT2848 - 3-prime edge 
    CGACCGTTTT CATCCCTAGT AATAATCCTC TGTTTCGTAT TCTAAGCTTC 
    AGTGCCGTAA TATAAATATA CTTATTTTCA AAAAGAAAAG AAAATGAACA 
    TTGGAAACGG TTTGATTTAG ACGAAATCTT TGTATATAGT CACTTTTAGT 
    GAATAGTTTT GTCTTCAACG AGGAGCAACA CTAGTAATGG AAGCATCATC 
    GATTGAACAG

AT4G23310.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 23
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 23 (CRK23); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: stem, leaf whorl, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 19 (TAIR:AT4G23270.1); Has 121765 Blast hits to 118949 proteins in 4447 species: Archae - 102; Bacteria - 13740; Metazoa - 44280; Fungi - 10260; Plants - 35406; Viruses - 410; Other Eukaryotes - 17567 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G23320.1

Model type
Protein coding
Short Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 24
Curator Summary
Encodes a cysteine-rich receptor-like protein kinase.
Computational Description
cysteine-rich RLK (RECEPTOR-like protein kinase) 24 (CRK24); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: central cell, stem, cauline leaf, leaf; EXPRESSED DURING: LP.06 six leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 21 (TAIR:AT4G23290.1); Has 117493 Blast hits to 116145 proteins in 4428 species: Archae - 91; Bacteria - 13531; Metazoa - 43566; Fungi - 10142; Plants - 32571; Viruses - 400; Other Eukaryotes - 17192 (source: NCBI BLink).
Link
InterPro Scan - TAIR