GT303

CSHL Arabidopsis genetrap mutant lines

Original: GT303

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT303

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 8856065 [Map]; Strand: c
      • AT2G20570.1 - [+] show detail - GBF's pro-rich region-interacting factor 1
        Distance: 0; Region: intron1 (CDS)
      • AT2G20570.2 - [+] show detail - GBF's pro-rich region-interacting factor 1
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT303 - 3-prime edge 
    NCTAGACTCN ATTAAATGAA CAGGTCTATA ATGGATTCGT ATTTTTTTTT 
    AAANTGGATT ATTCGTTTAA AATTCATTTN CTNGCTAAAT CTTCTAAATT 
    TTNCATATTT CANTCATNTT TACAAAACTC GTGTAAAAAC ATCACNTGCA 
    TCTCTATAAA ATTTTTTTNC TTTCAAATTA TNTAAAATAN TCAGCTGCTA 
    ATTGTNAATT TTATATAGTN TGTNAAAAAT TATTGAAAAA ATAATNAAAA 
    TGGTGGTTAT ATATATNTTG GGATNTNTNT GAAGGTGGAT TGGACACCAA 
    ANCTACACAG GAAATTCNTG GAGGCANTGG AACANTTAGG ATTGGACAAA 
    NCTGTNCCTT CTCAAATTCT GGANCTTATG GGATTCCATT GTCTCACTCG 
    TCACAACGTT GCTATTCACC NCCAATTTAG TATATTTCTT CTCCCTCNAC

AT2G20570.1

Model type
Protein coding
Short Description
GBF's pro-rich region-interacting factor 1
Curator Summary
Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.
Computational Description
GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1); Has 2420 Blast hits to 2125 proteins in 147 species: Archae - 0; Bacteria - 17; Metazoa - 163; Fungi - 64; Plants - 2094; Viruses - 12; Other Eukaryotes - 70 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G20570.2

Model type
Protein coding
Short Description
GBF's pro-rich region-interacting factor 1
Curator Summary
Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.
Computational Description
GBF's pro-rich region-interacting factor 1 (GPRI1); CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: GOLDEN2-like 2 (TAIR:AT5G44190.1).
Link
InterPro Scan - TAIR