GT5968

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

small plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT5968

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 5; Position: 3374634 [Map]; Strand: w
- AT5G10690.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing pro...
  Distance: 0; Region: exon11 (CDS)

TACCGACCGT TACCGACCGT TTTCATCCCT AAAGGTGAGC GTGAAATGGC 
AACAGACAAC AAGCTCTTGG GAGAATTTGA TCTAGTTGGC ATTCCACCAT 
CTCCAAGAGG AGTCCCTCAG ATCGAAGTGA CATTTGACAT TGATGCCAAT 
GGCATTGTCA CTGTTTCCGC CAAGGACAAG ACGACTGGTA AAGTACAACA 
GATCACAATC CGATCCTCTG AGTGTTGCGC CTTCCAAGAC GAGCACCATC 
AATTCCAAAT GAGTTGCTAC TGATACAGAT TTAGTTCTTT CAATATATTC 
ACTTTTGTCA GAAAGAAGAT GAACAAGAAA CAAAACCTTG TTCCCTAACC 
TTGTTCTTCT TCGAGTTCTC TTGCAGCCTA TGCTGTTGGA GATTCCTTCT 
TCCCTTGCAC CCCTTCCTTC TTTGTTCCTT CCTCTGGTAA TTCTTCTATT 
TGAGCCTTTG TTTCGGCTGT TTCTTCTTTC ACTCTGCCTG CTTTCGCTCT 
CTTCCTCTTT

5 prime edge [+] show sequence

Chromosome: 3; Position: 3116388 [Map]; Strand: w
- AT3G10110.1 - [+] show detail - Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 fam...
  Distance: 0; Region: exon1 (CDS)

GGATGCAACC ATCGAGGAGA TCCGAGCTCA AGAGGTTTGG AACAACTGCG 
CCGTTCGCGC TGTTACTAGT GGAGTCATGG GTCAGTTCAA ATATCCTCTC 
TTTCTCGACC TATATTGCTC CATTGCTCTG ATTTTCCAAA AATGCGAAAA 
GCTCTAGGTA CTTTGATTGG TTTGAGAATA GTGAAATTGG TAAAGTCTTT 
AGCTTTCTAA TAGTGATATG CTTCTGAGCT GGTTATTGAG TCACTTTCAG 
ATTGCACTTA ATAGTCGGAT TTGGTTAGGT GAATTGATGA TGTGAAATCT 
CAAATCGAAT CTATTTTCTA TAAATACTCT AAAAGGTGTA AAGCTACTAA 
TATAAATGCT CCGCCGGTTG TACAGTTGAT ATGACAGTTA GACATGTGAA 
GGATATTCAA TTGATTTGGT CACATTCTCT GTGAATTGTG GTGTATGAGG 
AGGACTCGGG TTGATAATGG GTTTGTTCTT GGGGGCATTA AATAATCCTA 
TTACGCATGA TACTATGACG GCTAGGCCGC AATTTGTGTT CACGGCAAAA 
CAAATGGGG

AT3G10110.1

Model type: Protein coding
Short Description: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Computational Description: maternal effect embryo arrest 67 (MEE67); FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: protein transport, embryo development ending in seed dormancy; LOCATED IN: mitochondrial inner membrane, chloroplast, mitochondrial inner membrane presequence translocase complex; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); BEST Arabidopsis thaliana protein match is: Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein (TAIR:AT1G18320.1); Has 680 Blast hits to 680 proteins in 194 species: Archae - 0; Bacteria - 0; Metazoa - 258; Fungi - 229; Plants - 130; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G10690.1

Model type: Protein coding
Short Description: pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein
Computational Description: pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885), Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT1G12775.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR