GT6458

CSHL Arabidopsis genetrap mutant lines

Original: GT6458

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT6458

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19252231 [Map]; Strand: w
      • AT1G51840.1 - [+] show detail - protein kinase-related
        Distance: -1522; Region: intergenic
      • AT1G51850.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 616; Region: intergenic
    Flanking Genome Sequence: GT6458 - 3-prime edge 
    ANGAGNACCG ACCGTTTTCA TCCCTAATTG TGAAGCTACT TGAATCCACA 
    CATGTCTAGG TTCGGCTTTG ATACCACGCA TTCTCTCGAT TTGTGGGCCC 
    TACCCTCGTA CGAAGACCCA TATATACGCT ACTACAGGAG ACCCGAAATA 
    TTTATTTATT GATATTACAA ATCAAAACAA GATATTTCCC GTACTTTGTT 
    CCTACACTCA CACGATACCA CTTTTTGGCA TGTCAGCCAA CCTTAAATCG 
    CTCCACCTCA AAAATACCTA ACTTTAGAAA TCTGTCAAGA TGTTCGAACG 
    GAAAATGTAA GTACACTTAA TTTGGTACCC GAATCAATTC TCTTAAATAC 
    TAGTAAAGTA CCACCATATT TCGTAAAATC GAGGTATAAC AAAATTTAAG 
    TTCATCTCAC TCGAA

AT1G51840.1

Model type
Protein coding
Short Description
protein kinase-related
Computational Description
protein kinase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51850.1); Has 549 Blast hits to 546 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 549; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G51850.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT1G51820.1); Has 171252 Blast hits to 122960 proteins in 4539 species: Archae - 111; Bacteria - 14101; Metazoa - 44553; Fungi - 9964; Plants - 82714; Viruses - 410; Other Eukaryotes - 19399 (source: NCBI BLink).
Link
InterPro Scan - TAIR