GT7807

CSHL Arabidopsis genetrap mutant lines

Original: GT7807

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT7807

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 30129777 [Map]; Strand: w
      • AT1G80080.1 - [+] show detail - Leucine-rich repeat (LRR) family protein
        Distance: -186; Region: promoter
      • AT1G80090.1 - [+] show detail - Cystathionine beta-synthase (CBS) family protein
        Distance: -327; Region: promoter
    Flanking Genome Sequence: GT7807 - 5-prime edge 
    AAATAAATAA AATTCATGAT TCTTGATTTC TGCATTTATT GCTTTCACCA 
    GATATTCCCT TCATTCGTCT TGTGTTGGGC CCTAGATCCG ACCGCTTCGT 
    GAACGGGACC CGACGTCTCC TTATCGTTTA CTTTTTTTTT ATTTGGGCTG 
    AGCCCATTTT CCCATTTACG ATATGTTGGG CTATTATTCA ATTTGTATTT 
    GGAACTGGGC ACTGTATTTG TTTTTGTAAC AAACCGTAGA TAGCAATTGA 
    TAAAAAGTTT CATATGTTTG ATTCTGAACC TTAAAATCAT TATTTTGTTG 
    TAACACGAGA ATCTGAATAA ACGGACGCGT GGTCTGTGCA TACGAAAAGC 
    ACATGCCCAT GGAGCAACAC ATGTAATACG TGCCATCTTA CTAGTAACAT 
    GACATATATG AATAATGAAG TAACTACGAA AGCATCAAAA CAAAGATTAG 
    AAGTTCATAA GCCTCGTCCC ATTTTCTTTG AGACTTTGAC TATCACCCAA 
    ATACAAATCT TCAT

AT1G80080.1

Model type
Protein coding
Short Description
Leucine-rich repeat (LRR) family protein
Curator Summary
Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development.
Computational Description
TOO MANY MOUTHS (TMM); CONTAINS InterPro DOMAIN/s: Leucine-rich repeat (InterPro:IPR001611); BEST Arabidopsis thaliana protein match is: receptor like protein 29 (TAIR:AT2G42800.1); Has 88991 Blast hits to 28047 proteins in 1079 species: Archae - 16; Bacteria - 3330; Metazoa - 23111; Fungi - 805; Plants - 56845; Viruses - 0; Other Eukaryotes - 4884 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G80090.1

Model type
Protein coding
Short Description
Cystathionine beta-synthase (CBS) family protein
Computational Description
Cystathionine beta-synthase (CBS) family protein; CONTAINS InterPro DOMAIN/s: Cystathionine beta-synthase, core (InterPro:IPR000644); BEST Arabidopsis thaliana protein match is: Cystathionine beta-synthase (CBS) protein (TAIR:AT1G15330.1); Has 517 Blast hits to 517 proteins in 144 species: Archae - 0; Bacteria - 47; Metazoa - 83; Fungi - 146; Plants - 195; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR