K00538

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00538

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K00538

Determination of introduced cDNA(s)

  • J033052N08 - Rice Full-length cDNAs - Original: J033052N08

    full reading [+] show sequence

    Nucleotide sequence: J033052N08 - full reading 
    GATGCGCGCA CCTCCCGCCT CCTCCCTTCC TCCGCCTCCG CGCCCTAGAA 
    CCTTCCAGAA GCGGCGGCCA AGGCGGCGTG GAAGCTCCAG GTGCGCGCCA 
    CCCCGCCCTC CGGAACCTTC TGGAAGCTCT CGGGGAGGGG GGAAGAGGTG 
    GGTGGGTGGG AGGATGGGGA CGTCGGATCT GGACCGGCAG ATCGAGCAGC 
    TGAAGCGGTG CGAGCCGCTG ACGGAGGCGG AGGTCAAGGC GCTCTGCCTC 
    AAGGCCATGG AGATCCTCGT CGAGGAGAGC AACGTCCAGC GCGTCGACGC 
    CCCCGTCACG ATATGTGGAG ATATTCATGG ACAATTCTAT GACATGAAAG 
    AACTATTCAA AGTTGGGGGT GACTGCCCAA AGACAAACTA CTTGTTCCTT 
    GGGGATTTTG TTGATCGAGG ATTTTATTCT GTTGAAACAT TTTTGCTTCT 
    GTTGGCCTTA AAGGTTAGAT ACCCAGATCG TATAACTTTA ATACGAGGAA 
    ACCATGAGAG CAGACAGATT ACACAAGTCT ATGGTTTCTA TGATGAGTGT 
    CTTCGTAAAT ACGGCTCAGT GAATGTCTGG AGATATTGCA CAGATATATT 
    CGACTATTTA AGTTTGTCTG CACTCATTGA GAACAAGATA TTTAGTGTCC 
    ATGGAGGCCT TTCTCCTAAT ATTACAACTC TTGATCAGAT AAGAGTAATA 
    GATCGCAAGC AAGAAGTACC TCATGATGGG GCCATGTGTG ACCTTCTTTG 
    GTCTGATCCA GAGGATGCTG TAGATGGTTG GGGATTAAGT CCACGAGGTG 
    CAGGATTCCT ATTTGGTGGA AATGTTGTTT CTTCTTTTAA CCACACAAAC 
    AACATAGACT ATATTTGCCG TGCTCATCAA CTAGTCATGG AAGGGTTTAA 
    GTGGATGTTC AATAACAAGA TTGTCACTGT ATGGTCTGCT CCTAACTACT 
    GCTACAGGTG TGGCAATGTT GCTGCAATCC TAGAGCTTGA TGAGAATTTG 
    AATAAGCAGT TCCGTGTATT TGAAGCTGCC CCACATGAAT CAAGAGGTGT 
    TCCTGCAAAG AGGCCAGCGC CAGATTACTT TCTGTGAGGC CGCAGATTCA 
    GCAGTGGGTA CAGCGTATCC TGCAAACAAG CACCGGCGGA TTAAGTCTTG 
    CGAGCTCCCA TTTTCTGAGA TGAGCTGAGC TCATGCTTTA CAAGACTCTT 
    AAGCCAGGAG TGCTTTCGAG ATGTATAAAT TGATTTTATG TCCCCAGTCC 
    TATCATTTGT AAGCCAAGAG AGTGGCTCAC ATTTGAGCTT GAGAAAATGC 
    CCCTGTGAAG GGAGTGGTGT AGATGAGGCC ACTCCTTTGA TTCCATGGGT 
    GTGCGTTGGT CCATGATGTA AAATTTTGTT GCTAGCCCGT TTGCCCCCTA 
    GGAAATCCTG TGCTGGAGAA TGATATGCAA ATGCTGTGCC TGAGTATTTA 
    TTGTTGTCAG AATGCAAATG CAGGAAGTTT TGT

    Gene models with high sequence identity

    1. AT5G55260.1 [+] show detail - protein phosphatase X 2
      E-value: 4e-170; Score: 594.00

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 1.6e-87
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 1.6e-87
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 1.6e-87
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 1.6e-87
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 1.6e-87
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 1.6e-87
    FPrintScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 1.6e-87
    Gene3D no description 2.1e-128
    superfamily Metallo-dependent phosphatases 3.6e-133
    HMMPanther SERINE/THREONINE PROTEIN PHOSPHATASE 4 CATALY 2.4e-253
    HMMPanther Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 2.4e-253
    PatternScan Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 0
    HMMSmart Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase 2.6e-147
    HMMPfam Metallophosphoesterase 1.8e-42

    See the detailed result >

    AT5G55260.1

    Model type
    Protein coding
    Short Description
    protein phosphatase X 2
    Curator Summary
    Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase.
    Computational Description
    protein phosphatase X 2 (PPX2); CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: protein phosphatase X 1 (TAIR:AT4G26720.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR