K00543

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00543

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K00543

Determination of introduced cDNA(s)

  • J033132B20 - Rice Full-length cDNAs - Original: J033132B20

    full reading [+] show sequence

    Nucleotide sequence: J033132B20 - full reading 
    GGCGGCCAAC CATGCCGCCG TCTCCCTCAC CTCTCGTTCC CGCCTCTTCG 
    CCAACAGAGG GCCGCCGCCG CCGCCGCCCC TATCACGGTC GCCTCCTTCA 
    AGAACACAAC TGCGCGCACC CGCGGCGCGT GACGCGGCCG GCGTCATCCC 
    CACGCTTCTC GCCGGCGGCG GCAGCCGGTG TCCTGAACCC TTCGAGGAGA 
    CCCCTGCGAG CTCCATCATC GTGGTGCTCG ATGAAATGTC GCCATGGAGA 
    TCGGTTTACT CATCGAGGAC ATCGGCGTGC AGCATAACAG CAGGAGACGT 
    AACGTACCAC CTCAGGACGC AGAATTTGGA AGATGCTCAG TGCATACCAT 
    TGACGGCACC ATATTGAGAT GTGTACCTGA GAACGCCAAT GGAGGCAGTA 
    CGAGGAATGG AAAAGGTGAA CACTTTGGCA AGGGAAAAGC CTGGTGTAGT 
    AGGAGCCTGG TAGCCCAGAG ATATAGAATG GAGGCAGTGC TACTCCCTTG 
    GGATGAGATG CTGCGATCGA CTTAGTAAAC TGTTTAACTG ACTTGAACAC 
    CTGATTGAAA TCATTGCCAG ACAGATCATT CAGGAAGAAC TGGAGTTCCA 
    TGGGATGGCA CCTGAGCTCA TCATGGTGCT GAGCATCAGC TACCGTGTTG 
    ATCACATCGG AGACGAAGAG GAGAGTGTTT GCATCGACAG AAAAGCCTAG 
    GTCAGCAACT ATCATAGCTC GAGGATGGAG AGCCATGCAC ACCTGTCTCA 
    CAGCCTTGTC AAGCACCGGC TTGGTCTTGA GCAAAGCCTT TCGCTAGTGC 
    AAAAAAATAC AAGTATATGC CTTGTCAGCT GTGGAATACA TCCATGAAAC 
    GTGTGGTGGA GTTGCATAGA GATGGTTAAT TGGTTATTGA AGGTACATCA 
    TGATCAGTGT GGTTGCGGCT TGGGCTTGAG AATACACACC TGAAGCCTAG 
    AGTTGTTTGC ATAGTTATCC TCTGCTTCCC CTATTGCCAT ATGGAAGTCA 
    TGCTCCAACT TCATGGCTAA TAACAAGAGC ACTTCAGAAA CTCTCGCTGC 
    AATCAGTTTG CTGATTTGCT TACTTGGAAC CACTGCGCAT CTTCATCTAG 
    TACTCTTTGT TCTATATATA GAGTATAAAA GAGTGGTTTG TTTTGCTACC

    Gene models with high sequence identity

    1. AT4G36470.1 [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
      E-value: 2e-21; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam SAM dependent carboxyl methyltransferase 4.1e-36
    superfamily S-adenosyl-L-methionine-dependent methyltrans 5.9e-43

    See the detailed result >

    AT4G36470.1

    Model type
    Protein coding
    Short Description
    S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
    Computational Description
    S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR