K01136

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01136

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01136

Determination of introduced cDNA(s)

J023050C09 - Rice Full-length cDNAs - Original: J023050C09

full reading [+] show sequence

GAATATAAAA GTTGGAGAGA AACAGGTGAA GCTGCAATAT TTCGCCACAT 
CTTCTTCTTC TTCTTCTCCA TGCCGATCGC CTCCAAGCTC GTCTACTTCC 
AGCGCCGCCG CCCATCGCCG GCGCCGCCGG AGCCGGAGCC GGAGCCTCCC 
GACCCTCGCC GCAGGCCCTG CCGAGCCGGA GCCGGAGCCT CCGCCGCACG 
CCGCCGCAAG CCGGTCCATT TATATGGAGG TCAAGTGACC TCTTGGAAGA 
ATGACCGTGG GGATGAATTA CTTTTTGTAA GCAGCAAGGC CACTTTCAAG 
CCTCCAAAAG CAATCCGTGG TGGCATACCC ATTTGCTTCC CCCAATTTGG 
CACTCATGGA ATTCTTGAGA AACATGGATT TGCAAGGAAT CGGTTCTGGG 
CTATTGATGA TAATCCTCCA CCTTTTCCAA CAAGCACTGC TGCTAAAGCT 
TTTGTTGATC TTATTCTGAA GACTTCTGAA GAAGATCTCA AGATATGGCC 
TCATAGCTTT GAATTCCGAT TAAGAGTTGC TCTTGGGCCT GGAGGAGATT 
TGGCTCTCAC TTCTCGAATA AGGAACACCA ACACTGATGG AAGACCATTC 
TCATTTACAT TTGCATACCA CACGTACTTC TCTGTATCTG ACATAAGTGA 
AGTGCGCATT GAAGGCTTGG AGACACTGGA CTACATTGAC TGTCTGAGGG 
GAAAAGAGCG ATCCACAGAG CAAGGGGACG CTATTGTGTT CGAATCAGAG 
GTTGACAAAA TATATCTAGA TGCACCAGCA AAAATTGCAA TCATTGATCA 
TGAGAAGAAA CGGACATTTG TCTTAAGGAA AGACGGGCTT CCAGATGCTG 
TTTTGTGGAA CCCATGGGAC AAGAGGACAA AAAACATGCA AGACTTTGGG 
GATGAAGAAT ACAAACATAT GTTGTGTGTT GAACCTGCAG CCGTTGAGAA 
GCCCATTACC TTGAAGCCTG GCGAAGAGTG GAAAGGAAAA ATGGATCTCT 
CCGCAGTTCC TTCCAGTTAC TGTAGCGGGC AGTTAGATCC AAATAAGGTT 
CTTCAAGGCT GAGAGTTCTA ATTTACTACA CCATGTACAG GAACACTTAA 
TGTCACTTAT ATTATCTGGT GCTGATGCTG CATCTTAGCA TCTACTTGCC 
GTCCACTTCA TTATCTTACC ATTTCCACAT TTTAATGCTT ATTTCTTTCT 
GTATGAAGCA GCAGAGAGAC ACTGAAGTAA CAAACGATCC TAATCTTGGG 
AAAATCTGCC GTCAGTGAAC TGAATTACCG ATTAGTAGCA CCACTAAAGT 
ATTGTTTTCT TACCGATCAG TAGCACCACT AAAGTATTGT TTTCCGGGTC 
ATGTGGATAA TGATGATGCA TTGATCTGCA TCTCGGATGT ATCTGGCTAA 
TTATATTTGC AAACTGTTCC CTGTACCTTT CCTTTGTTAT TATCATTATT 
ACTGCGAGTA TATCTGGTTG ATTTTATTGT TCCTCTATTA ACCAATAATC 
ATCAGAATTC AGAAGACT

Gene models with high sequence identity

AT5G57330.1 [+] show detail - Galactose mutarotase-like superfamily protein
E-value: 4e-128; Score: 455.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	APOSPORY-ASSOCIATED PROTEIN C-RELATED	9.6e-113
superfamily	Glycoside hydrolase-type carbohydrate-binding	2.9e-76
Gene3D	Glycoside hydrolase-type carbohydrate-binding, subgroup	7.2e-80
HMMPfam	Aldose 1-epimerase	3.7e-64

See the detailed result >

AT5G57330.1

Model type: Protein coding
Short Description: Galactose mutarotase-like superfamily protein
Computational Description: Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink).
Link: InterPro Scan - TAIR