K01301

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01301

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01301

Determination of introduced cDNA(s)

  • J023082N23 - Rice Full-length cDNAs - Original: J023082N23

    full reading [+] show sequence

    Nucleotide sequence: J023082N23 - full reading 
    GGGGTCCAAA AGAGCTCCAC CGCAATGCAA CCAATCCCTT GTCTCTCCGT 
    CGAGGATCAG TAATGCTTCA CGACGATTGC ATCGGTGAGG GACTCTCAAG 
    CCCCATAGCT GCTCAAATTC TTGATTTCTG CGATGACGGC CTAGGTGATG 
    ATCTCTTCGC TGCAGTGGCC ACTACCTCCG AGCAATTTGC AGCCTCTTCC 
    GAGGATGGTT CATCGTCGTC CACAGCCACA CCTCCCCTCT GCAGCAACAG 
    CAATGACATC ACAGCTGTTG CAGACACAGC TTTCTCCCCA TTACTCTCCT 
    TCGACTCCAC CCTCTCAGCC TTCCTTGAGC AAGAGCAAAA CCCTGACCAG 
    GACACCAAGC TACTTCCCTC CATTGATGAA ACCTTTACTG CACCAGCATA 
    CTATCCAGCT GCCACCGAGG CCAACATAGA ACAATTCAGC CAAATAATGG 
    TTCCAGAGCA TACAGATGCA CCAATGCCCC CAATGCAAAC AAACAGGACT 
    GCCAATGCCT TGCTGCCTCT AGCTTCAGGG TATGACGACG AGTGTTTCAC 
    AGCAGCACTA GCTGGAGGGT ACATGGGTCT GGATGGAACT CTGTATGACC 
    AAACAGGAGT AATGATTCCA AATTGCAATG TGGAGACACC ACAAGTAGGA 
    TTTTTCAACC ATAATAGTAC TAGTAACAAT GGTATGGTGA TGGATTTGAA 
    TAATTTTGGA GAGTACCAGA GGATGATGGA AGGTGAAGGA CTGACCAGAA 
    CATATAGCGA CACAGATTCG ATGCATGGGG CGTTTAATAA CGCTGCAGAG 
    ATGCAGATGG GAGAAAACAC CCAGCACATG GTAACTGGAT GCAATGATAG 
    CCCACTAACG TTGCCTTCAA CAGAAGGCTC AAGCTTGGAA GATACCCCCT 
    ACAAAGGTGT GCGTCTAACA GCTGAACAGA GAAAGGAAAA GATCTCCAGG 
    TACATAAAGA AAAGGAACGA AAGGAACTTC AGCAAAAAAA TAAAGTACGC 
    TTGTAGAAAA ACCTTGGCGG ATAGCAGGCC TCGGGTCCGC GGAAGGTTTG 
    CCAAGAACGA CGAACTCTGT GAAGCTACCA GATCAAGCTC CCAAGATTTT 
    GAACAATATG AACATGTTGT GGGAATGAAG GGAGAAGACA TGCTTGATTC 
    TTCCAATATT TTGGCACATT TGAGTGGAAT GAACCCTTAC GGCTATAAGT 
    ACAACAGCAC TGTGGAATCC TGGATATAAT TCTCATAAAC ACACAAATTA 
    AAGTGTGTTT TCCTTTCAAT TGTGCAAGCA TTAAACACAG TTTTCCCTTG 
    CTCCCAGTAA ATAAGACTGA TGCTTTAGAA GCTCTATTCG CAAGAGAAGT 
    GCTTAGGTCA AGTTATTGTT TCTGCACACT ACTGATTTGT AAATAGAATT 
    GTTTCCTTGT CATAATAGAG ATAACAAGTT TC

    Gene models with high sequence identity

    1. AT1G04500.1 [+] show detail - CCT motif family protein
      E-value: 7e-32; Score: 135.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam CCT domain 4.3e-19
    ProfileScan CCT domain 15.507

    See the detailed result >

    AT1G04500.1

    Model type
    Protein coding
    Short Description
    CCT motif family protein
    Computational Description
    CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT2G33350.2); Has 1789 Blast hits to 1789 proteins in 111 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 2; Plants - 1654; Viruses - 0; Other Eukaryotes - 125 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR