K01313

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01313

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01313

Determination of introduced cDNA(s)

  • J013124K14 - Rice Full-length cDNAs - Original: J013124K14

    full reading [+] show sequence

    Nucleotide sequence: J013124K14 - full reading 
    GTTTTTTCCT CCACCGATGG CTCTTTCCAC GAGTCTCCTC TCCTGGTCCT 
    CCTCCGACGA CGACGACGGC GCCGGCGCCG GCGGCGAGCT GTCCCGCCCT 
    CGCAGGCGGT GGCGGGCGCT TGTCCTGGGG CTCGGGGTGA GGAGGAAGAG 
    GAGCATGGAG GGGGTGTTCG GGTTCAGGGA GATGATGGGG GAGGAGTTCA 
    TGGGCATGTT CCTCCCCTTC TTTGGCAAGA TGGTTCAGAA AGTGGTTTCA 
    GAAGAAGTAG AGAAAGCAAT TTTCAGACAA GTCAGCACAC CAGCGCCTCC 
    AAGACTGCTA GCAGGATTGA ATCAGCAGCG TCCAAGGTAT CAACTCGTGT 
    TCCTGAATGA ACTAAAGCCT GTTTACACAC TGATGAAATT AGAAGCCAAG 
    GATGGACCGG GTCTTAAGGT GGCTATAGTC GAAAGACTCG AAAACAATCA 
    GATGCGCATC GTCAGGTTCG GTCATCTTGC TTCTGCTAAG GTTGAAGTTG 
    TAGTCCTCCA CGGCAACTTT AATGCTAAAA ATGAGGAACA ATGGACCCCT 
    GAAGACTTCA GCAAGCAGAT AGTATGCGGG CGAGAGAAAA GCGCACAACT 
    TCTCACCGGA AATCTGACAC TGAAGCCCAA TGGAGGGATT TGAAAAGCAC 
    TACCCGCCAA TGTTGGATGA CGAAGTTTGG CGTTTGGAAA AGATCGGCCG 
    CAATGGAGCT CACCACCAGG CCTTGACAAA CAGTGGAGTT GATACTGTAC 
    AGAAGTTCTT ACAATCATAT TTTACGGACG AAAAGAAGCT TTTTCAGACT 
    TTTAGCAAGA TGTCACAGGC AGCTTGGAAA ACCATCATAA GCCATGCCAT 
    GACATGTGAA GTCGGTGACG ATCTTTGCTT GTATGAAGTG AAGGGCAACA 
    ACGTGGGACT TTTCTTCGAT GCAATATATC AGCTTGTTGG GGTGAAGTTT 
    GGTGATTCTT ACAAGCCCAT AAATGAGCTC GACGAAATAG AGCAGAGTGC 
    AGTTGAAACA ATGAAGCAAT TGGCTTATGC GAATATAAGT GGTATTCAGT 
    ATGACCATAA GGTGGTCAAC AACTATCCTG TACCGCTTCA TAGGTTCCAT 
    TGTGGGGGAA CTTCTATGTT GACTGACTTT ATTCCTAAAC AGCAGATCCC 
    AACTTGTGGT CAATACAATT CAGCCCTGGC TGGTCAACCA TTTGAATCAA 
    CGGAGAACTT TTCTTCATTC CAAGAAGCCT CTAATGCTTC AGTGGATATG 
    TCAAGATTTG TGCAGGGTCA AACCTCCAAC GTGCAGTTTA GCCAACAGTT 
    GGGCATGGGC AATTTTATCC CACATCATTC AAATCAAGGA ACATTCATAC 
    CCAGACCAAG AATCACTCCT CTGTGTATAC CTAATACCGA AAAAACATAT 
    TTTAATCCAA ACGCTCATAG CAGCATCCAG GCTGATCATG CTGCCACACG 
    AATTGGCCAG TATGCACATA ATGAGCGATC TCATTCACCT GAAGAATCAT 
    ACAAGCGCTT TTCTCCAGAT AATTTCCTCC ATACAGATGA AGTTGTGGCT 
    TTGATGCAAC CTCACTTAGT GCCTCCGAGC AACAGCGAGA ATTTCAGTAA 
    CCTGCTCAAC CTATCAAGCA ATGACCAAAC CTCACAGCAA ATTGCCGCTC 
    CATTCCAGCC ATCAAGAACA AACAGCTTTG ACTCCAGCTC ATGTGATCAG 
    CTCATACAGA ATTTCATTTC TCAGTTTTCT AGCAACGAAA GAGTTGCGGT 
    GCCATTGTCC CCACGCAAGT GGGTCAAGAT CAGGGCAGCG CTGAAGCTGG 
    CATCTGTGGG TAGGCTCTCC AGAGCCTCGA GAAAGGCTTC GCATCGCCCC 
    CCAGCAAGGC CAAGGCTTGT CCCAATAGTA TGAGCCTGGT GAAAACAGGT 
    TGTAAAAAAT TTAGATTAAA GATCGATCTT GGTGTTGATG CAGAAGTTCT 
    AGAGACATCT GGTCAACTGA AACTAATGAT TTTGTCAAAA AGTTAGGTGT 
    ATGTAATCTG TACATAGTAG AGCCTGCTTG TACTTCATTT AGTGTTAGTA 
    TTTCCCAGCA GAGGATTCTG ACCTCTTTGT TATCTCTGAA TTTAGAACCA 
    TGTAAACAAA AAGACCATGT AATGTATTCC TTTTTTGCAC CTAATGATCC 
    TTGAGAGAAA TTTCCTTTT

    Gene models with high sequence identity

    1. AT5G57580.1 [+] show detail - Calmodulin-binding protein
      E-value: 7e-24; Score: 109.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Calmodulin binding protein-like 2.1e-28
    HMMPfam Calmodulin binding protein-like 2.5e-53

    See the detailed result >

    AT5G57580.1

    Model type
    Protein coding
    Short Description
    Calmodulin-binding protein
    Computational Description
    Calmodulin-binding protein; CONTAINS InterPro DOMAIN/s: Calmodulin binding protein-like (InterPro:IPR012416); BEST Arabidopsis thaliana protein match is: Calmodulin-binding protein (TAIR:AT4G25800.2); Has 341 Blast hits to 322 proteins in 21 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 339; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR