K01409

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01409

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K01409

Determination of introduced cDNA(s)

  • J013075G04 - Rice Full-length cDNAs - Original: J013075G04

    full reading [+] show sequence

    Nucleotide sequence: J013075G04 - full reading 
    GAGTGCACCA GAGTCACAGA AACACATCAC ACATTCGTGA GCTCAGCTTA 
    GCCATGGATA ACGCCTACAT TATTGCCATT CTCTCTGTAG CTATCCTCTT 
    CTTGCTCCAC TACTACCTCC TCGGCCGCGG CAATGGCGGG GCGGCGCGGC 
    TGCCGCCGGG TCCACCGGCC GTCCCGATCC TGGGACACCT CCACCTCGTC 
    AAGAAGCCGA TGCACGCCAC CATGTCCCGC CTCGCCGAGC GGTACGGGCC 
    GGTGTTCTCG CTGCGCCTCG GGTCGCGGCG CGCCGTGGTG GTGTCGTCGC 
    CGGGGTGCGC CAGGGAGTGC TTCACCGAGC ACGACGTGAC CTTCGCGAAC 
    CGGCCCAGGT TCGAGTCGCA GCTGCTGGTC TCGTTCAACG GCGCCGCGCT 
    CGCCACGGCG AGCTACGGCG CGCACTGGCG CAACCTCCGC CGGATCGTCG 
    CCGTGCAGCT GCTCTCCGCG CACCGCGTCG GCCTCATGTC GGGGCTCATC 
    GCCGGCGAGG TCCGCGCCAT GGTGCGGAGG ATGTACCGCG CCGCGGCCGC 
    GTCCCCCGCC GGCGCCGCGC GCATCCAGCT GAAGCGGAGG CTGTTCGAGG 
    TCTCCCTCAG CGTGCTCATG GAGACCATCG CCCACACCAA GGCGACCCGC 
    CCCGAGACGG ACCCGGACAC CGACATGTCC GTGGAAGCCC AGGAGTTTAA 
    GCAGGTCGTC GACGAGATCA TCCCGCACAT CGGCGCGGCC AACCTGTGGG 
    ACTACTTGCC GGCGCTCCGG TGGTTCGACG TGTTCGGCGT CAGGAGGAAG 
    ATCCTCGCCG CTGTAAGCCG GAGGGACGCG TTCCTTCGCC GCCTGATCGA 
    CGCGGAGCGG CGGAGGCTGG ACGACGGCGA CGAGGGCGAG AAGAAGAGCA 
    TGATCGCCGT GCTGCTCACT CTGCAGAAGA CAGAGCCGGA GGTGTACACC 
    GATAACATGA TCACAGCTCT AACGGCGAAC TTGTTCGGAG CAGGAACAGA 
    GACAACCTCG ACGACATCAG AATGGGCGAT GTCGCTACTG CTGAACCACC 
    CCGACACACT CAAGAAAGCG CAAGCCGAGA TCGACGCATC CGTCGGCAAC 
    TCTCGCCTGA TCACCGCCGA CGACGTGACT CGCCTCGGCT ACCTCCAGTG 
    CATCGTCAGG GAGACGCTCC GCCTGTACCC CGCCGCGCCG ATGCTCCTCC 
    CGCACGAGTC CTCCGCCGAC TGCAAGGTCG GCGGCTACAA CATCCCGCGC 
    GGGTCGATGT TGCTCATCAA CGCGTACGCC ATCCACCGTG ACCCGGCGGT 
    GTGGGAGGAG CCGGAGAAGT TCATGCCGGA GAGGTTCGAG GACGGCGGGT 
    GCGACGGCAA TCTCTTGATG CCGTTCGGGA TGGGGAGGCG GAGGTGCCCC 
    GGCGAGACGC TGGCGCTGCG CACAGTGGGG TTGGTGCTGG GCACGCTGAT 
    CCAGTGCTTC GACTGGGAGA GGGTCGACGG CGTGGAGGTC GACATGACTG 
    AAGGTGGCGG GCTCACCATC CCCAAGGTCG TGCCGTTGGA GGCCATGTGC 
    AGGCCGCGCG ACGCCATGGG TGGTGTTCTT CGCGAGCTCG TCTGAATATT 
    TTTTGGCGGC GTTTGCATCT CCAGGACGAA CTCATGTATT GAAAGCACCA 
    AAAGTAAGTA GCAAATAAGC TTCTCGTGAG CATACACATA ACACATGTGA 
    GCTTGTAATG TGGAATAAAT TACACGTAGA GGATTTGGAA GAGAGTGACT 
    GCGCTAGCAA TCGCTCTTTG AGAGTTGTGT TTTACAGTTT TAGTGAGGAA 
    CCAATTTGTA TGAATGTGCA ATAATCATGT ATAAAGTATA ATTGTACACG 
    CCAGGTATTT CAATTTC

    Gene models with high sequence identity

    1. AT4G37320.1 [+] show detail - cytochrome P450, family 81, subfamily D, polypeptide 5
      E-value: 1e-103; Score: 374.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Cytochrome P450 6.4e-95
    HMMPanther CYTOCHROME P450 SUBFAMILY 81D 1e-157
    HMMPanther Cytochrome P450 1e-157
    FPrintScan Cytochrome P450, E-class, group I 4e-53
    FPrintScan Cytochrome P450, E-class, group I 4e-53
    FPrintScan Cytochrome P450, E-class, group I 4e-53
    FPrintScan Cytochrome P450, E-class, group I 4e-53
    FPrintScan Cytochrome P450, E-class, group I 4e-53
    FPrintScan Cytochrome P450, E-class, group I 4e-53
    FPrintScan Cytochrome P450, E-class, group I 4e-53
    FPrintScan Cytochrome P450, E-class, group I 4e-53
    FPrintScan Cytochrome P450, C-terminal 1.1e-13
    FPrintScan Cytochrome P450, C-terminal 1.1e-13
    FPrintScan Cytochrome P450, C-terminal 1.1e-13
    FPrintScan Cytochrome P450, C-terminal 1.1e-13
    Gene3D Cytochrome P450 2e-122
    PatternScan Cytochrome P450, conserved site 0
    superfamily Cytochrome P450 1.6e-127

    See the detailed result >

    AT4G37320.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 81, subfamily D, polypeptide 5
    Curator Summary
    member of CYP81D
    Computational Description
    "cytochrome P450, family 81, subfamily D, polypeptide 5" (CYP81D5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 4 (TAIR:AT4G37330.1); Has 34217 Blast hits to 34042 proteins in 1758 species: Archae - 61; Bacteria - 4626; Metazoa - 11716; Fungi - 7014; Plants - 9489; Viruses - 3; Other Eukaryotes - 1308 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR