K01446

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01446

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01446

Determination of introduced cDNA(s)

  • J023034O04 - Rice Full-length cDNAs - Original: J023034O04

    full reading [+] show sequence

    Nucleotide sequence: J023034O04 - full reading 
    GTGGGACTAG CTAGACATGG CGATGGGGAA GAATGGGTTG CTGGGGTGGC 
    TGTGCGTCGT CGTGCCGGGG CGGCGGCGGC GGCGGCGAGG GGCGCGGCTG 
    GTGCTGTGGG GAGGGGAGAG GCGGGCGGCG GCGGCCGGGA GGATGGCCGG 
    GGAGGTGATG ATGGAGCACG CGGGGCGCCT CGTGGTGTGC CGCGCCGACG 
    GGTTCTGCCT CGGCCGCGCG GCCCCCGTGC TCGCCATCGA GGACCGCCTC 
    GACGCTTGCG CCACCTACCT CGTCCTCCCC GTCGACCGCC TCCCCCAGGG 
    CCGCGACGTC GTCACCGCCG CCTCGCTCGC CGCGCTCACC TACGACAGGG 
    CCGCCGGCGC CCCGCTGCTG GCCGGTGGCG CGAAGAGCCC GTTCGAGTAC 
    GTCAAGGACG ACGGCGGACG GACGGTGATC AAGGTCACGG AGGAGTTCAT 
    CGTCAAGGCC GTCACGGGGA GGCGGCCACC GGCTGGCGGC GGCGGCGAGG 
    GGGAGGACGC GCATGGGGCG GCGGCGCTGT GCAGCACGCC GGAGCTGAGG 
    AAGCACTACG AGCAGCTGGT GGGCGCGGCG AGGGGGCGGC CGTGGTCGCC 
    GCGGCTGGAG ACGATCAAGG AGCGGAATGG GCGGCGGAGG GTGGTCGACG 
    TCGTCGTCAG CCCCACCGGC AGGCTGTCTC CGGTGAGGTT GCTCGGGTTG 
    GACAAGGGAA TCAAGTAGAC ATGCATGAAA ATTTTCGTCT AATCCTCTCT 
    TCTAATTGGC TGCTGCTAGT TTTGCTTTGA AGATTGAAGC GATTTTTGGT 
    TGGAAATTTG GATTAGATGT ACATATGTTT TGGATGGGTA TCTCTTGTTT 
    GTTTCTACAA GAATTTTGTA CATCCAGACC GATCTCTGTT TGTAAGTAAG 
    GTAAATGATT TACCGTCAAA TGGCAAACAG ATTGCATG

    Gene models with high sequence identity

    1. AT5G12340.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); ...
      E-value: 2e-15; Score: 80.10

     

    InterPro Scan Digest

    See the detailed result >

    AT5G12340.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR