K01806

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01806

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01806

Determination of introduced cDNA(s)

  • J033072F22 - Rice Full-length cDNAs - Original: J033072F22

    full reading [+] show sequence

    Nucleotide sequence: J033072F22 - full reading 
    GGAAGGCAAG AGGGGAAGCT TTGCATTTGC CCGGCCGACT CTCTTCTTGG 
    TTCTTGGTTG TGGCGTCGGC GTCTCCGTGT TGTTTGGGCT GGCCACCGTT 
    GCTCGCCGTT CTTGGGGGCA GGCAAACGGC ACCGGCGGTA TGGAGGCATT 
    GGGAGATATG GAGGGGGAGG AGGGGCAGCG GCGGCAGCAG CAGATACGGG 
    TGGTGCGGTG CCCCAAGTGC GAGAAGTTCT TGCCGGAGCT CCCCAACTAC 
    TCCGTCTACG TCTGCGGCGG ATGCGGCGCC ACTCTCCAAG CAAAGAAGAA 
    CTCAGCATCT GAGAATTCCT CAGAGAAATC TGATGGTGGA CATGTGAAGT 
    ACCTTGAAGT GCTGGAGAGT TCACCAGATA ACAAAGGAGC TGCATCTAAA 
    GACACTTGTG AGGCTGCCCA AGAAGGAGAA GCCAAAAATG GAGAAGCTAA 
    AGCAGAAGAG AGACAGGTAC TTCTTGACAG AATGGCAGCT TGTGATGATA 
    GCCGAATTCC AAGAGAACCA AATGCCTTGA AGCTTGAGGC TTCACTTAGA 
    GATGACAGCA GGGAAATTCG GGAGGCCAAG TACCGGCGCA TCCGCAGTGA 
    GGACAAAGGA GAAGCAAAAC ACACAGTGAG AGCCAGAGAC AGATCGCCAA 
    GATCAGTTGT TGATGCCATC CCTCCGAATG CATATCCTGC AGAAGGCCCG 
    TCTGACTACC ATATTAAGTC AAGATTCAGA CATACCAATG GTGAGCAAGC 
    TGATATGAGA AATTTGGAGG GCCTAAACAG AGTCAATGGT CTTGAAAAAG 
    ACCGTGCTGA TCTGTTACGG ATGCTTGATG AGCTGAGGGG TCAGGTGCAG 
    AGATCCTGTG AGATCACCAA CAAGCCAAGT GGAAGTACTT CTACAGATAA 
    AGCGGTGGAT GCCTCAGGGT TATATAATCC TCGTGAGCGG TTGAGTCGGT 
    TACGACATGG TTCACCTCAG TTGCAGCGGA GTGGTTCTCA GCAGTCACCA 
    TCCTTGAATG GGCAAGCTCC TTGCATTCCG CAAGCTTATG CTCCAGGAAC 
    TGCTCAGCAA GATCTTCATG GATACGGGGA GCCAATGGCA CACATGGGGG 
    CTCCAAGCTA TCCTGTTGGC ACATATCCAT GGAGAAATTT TGATAATTAT 
    TTTTATGGAC AGTATGATCC TGACCCTCTG ATCTCTTACC ACCATGATGG 
    CTTCTACCAT CAGCCTGCCT GTTCTTGTCT ACATTGCTAC CACCGTGAGT 
    TCTTACCTGT TCAGGGGCCT CCTCTGGGTT TCAACCATCG CAGGGTACCA 
    CCGTATGTTA TGAATAATCC TAGAGTTTAC CCGGTTGATG GTCCTGCAAT 
    GTTTGGCACA CAGAATTACA ATTCAAGAGT CAACGCTTCA ATGCAGCGCA 
    ATCACATGAG GGCCGCTATG AGTAAAAAAC CTGCACAGAC TTGTGAACCG 
    ATTGCATGTG GTGCCCCATT CACTATATGC TACAACTGCT ATGAAGTACT 
    GCAACTTCCG AAGAAATCCC CCGTGCCAGG GAAGGATGAG TACAAATTAC 
    GTTGCGGGTC ATGCTCACAT GCGCTTGTGG TCAAGCTTGA TGGAAGCAGG 
    CTTGATGTTT CAGCACCTTC ACCTATTTCA CACATATCTG GCGGCAGCAA 
    AATTAGTTCC AATGATGGCC AAGGAAGCAA TGCGAATTCT GCTCCACATG 
    AGAGGGTGCT TCCACTTTAT AGTTTTTCTG CAGCAAGTCA TGGTTCTCAA 
    GACCTACCCT CGAACTCAAG TGAAGCTGAA AAAATGCAAG GGATATCGTC 
    TTCTTGCAGC ATTTCTGAAG ATGAGAACAG CCCTGCGAGA TCTAATTCCC 
    AGAGGGACAC CCCTGGGTCT AGGGATCTTC ATCCTGAAGC TGAGGTGTCT 
    ACCCGTGTTC CAAGTTTACA TCTTCGTGAT CATTTTGGAT ACTCGCCATC 
    TGAGAAGGTA GTTGATGGAT CAGGGAAAGG AAGCAGAAGT ACTCGATCTG 
    AACATGAGAA GGCTGTGTTG ACAGAAAGTT TCAAGCAGAA CACTGTAAAA 
    GATGTATCAG TAGTGAACAT AATGGACTTG TCGGATGATG AGTATGATGA 
    TCCTGACTAC ATGCAAGATC GAGGTGATGT GGCACAACCT GTAGATCACC 
    CTCGGGCCGT GAAAACGGGT GATTCATTTT TCACCAATCT CATAAAGAAG 
    AGCTTCAAAA TTAACAACGG AATGGGCAAT GGCAGAGCAA AGGTTTTCAT 
    TAATGGCTAT CCCATCTCTG ATCGGGCGGT CAGGAAGGCT GAGAAGATAG 
    CTGGACCAAT CTATCCTGGT GAATACTGGT ATGATTACCG TGCTGGTTTC 
    TGGGGTGTAA TGGGACAGTC TTGCCTCGGC ATGATACCGC CATATATTCC 
    AGAACTCAAT TATCCTATGC CCAAGAAATG CGCTGCTGGA AATACAGGTG 
    TATTTGTTAA TGGGAGAGAA CTTCACCAGA AGGATTTGGA TTTACTTGTG 
    GGTCGAGGAC TCCCAGATTC TCCCGGTAGA TCATACAGAG TTGAGATGTC 
    CGGTAAAGTG TCGGATGAAG TCTCTGGTGA GGAGCTGTAT TGTCTCGGCA 
    AACTTGCACC AACCGTCGAG AAAATGAAGC GCGGATTTGG CATGAGAGTC 
    CCCAGAATCA TCCCTTGAGA TCAGTGATTC TTCGGCACAA CTGTAGAATT 
    CAAGACCCCA TTTTGGATGC TGTTTCGGTT CTTCTGCGAA ATGCTTTGAT 
    GCTTGTTGGT TGTTGATTGT CCAGCCGTCT GTTTGCGTGG TCTCATGATC 
    TGAGATGTAT AATCTGTGGT TGCTTTGACT GGTGCTTGTC TGAAAAATTA 
    TCCAATGGAA ATTTTGCAAT GTGAAGTTTG TTTTGTGC

    Gene models with high sequence identity

    1. AT3G61670.1 [+] show detail - Protein of unknown function (DUF3133)
      E-value: 1e-87; Score: 322.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF3133 4.3e-18
    Coil coiled-coil 0

    See the detailed result >

    AT3G61670.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF3133)
    Computational Description
    Protein of unknown function (DUF3133); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3133 (InterPro:IPR021480); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3133) (TAIR:AT2G46380.1); Has 340 Blast hits to 282 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 13; Fungi - 17; Plants - 302; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR