K03150

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03150

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
cauline leaf (PO:0000013)
  • desaturated green (PATO:0001272)
    (Cauline leaf::Color::pale)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • desaturated green (PATO:0001272)
    (Rosette leaf::Color::pale)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • desaturated green (PATO:0001272)
    (Stem::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03150

Determination of introduced cDNA(s)

  • J033031H05 - Rice Full-length cDNAs - Original: J033031H05

    full reading [+] show sequence

    Nucleotide sequence: J033031H05 - full reading 
    GTGTGTCGCC ACCCACAGCC TCTCCCCCCT CTCTGACGGC GCCGCCGCAC 
    GACACGACAA CCAACCGAAG CCAGCCTCTC CCGCCGCCTT CGCCGCCGCC 
    ACCGTCGCCG CCGGACAGCA GTATAAATGG AAGTTGGTGC CAGCTCTATA 
    ATGGAGGATG CCAACGGAGT AGTCGATTTG GATGTTGACA TTGTTGGCCT 
    AGAAAGTGGT GCTGCTTGCA GCAAATTTGT CAAAACTGAA GATCCTGATG 
    CTACAGAGTG TTCAAGTTCT TTTGGGGACA CTCTGTCAGG GTCAGAAGAT 
    GATGCAAGGC CTTCAGAGAT TAGTGACATT GAGGTCGACT CACCTTTCTG 
    CCGCTATCCT GCTAATGGTG ATGCTGCTGC TCTCATGGAT GCAGCTGTTT 
    CCGACAATTT GGATAGATTA TTAAAGAAGA AACGGGTAAC TGATCACTGG 
    CGAAAGTATA TCAGCCCATT AATGTGGAGA TGCCAATGGT TGGAGCTACG 
    TATGAAGGAT TTGCAATCTC AAGTATCGAG ATATGACAGA CAACTTGCAG 
    TACTAAAACA TGAGAAGGAG TTGCAGACAA AAATGATTGA GTTGGATTGC 
    TCCTCATCGA GATCAGTACC CTTCTCTTCT CATTGCTGCA GGAAGACTAT 
    GAAGAGGAGG AGGAGAAAGA GAAACGAGGA GAAAATGAAT GCTTCATCGT 
    ACATCTCAAA TCACACTGTA TTCTCTTATT ATGAGAAAAC GGAAGCAGAT 
    GCCTTTTCTA TTGATGACGA TGAGGACACA GATGAAAACA CCACAGTTAA 
    CAATGAAACT GATTGGCTAC TTGGAATTAA GAGAGGTGAA GCTACTGTCG 
    AGCAGATTCT TTTGAGCATT CAATCTGCTC AAGATAAAGT GCTTAGCCTG 
    AGATCTAGTC TCAAGAAGGC AATGGCCAAA AAGAGTAAGG GAGCAATCCT 
    TAAAGTCAAC ACACACATGA ACGGTGCACA GAGCTCAAGT TGCTCACCAG 
    GAAAGGGTAA AGTGCTTGAA AGATCACCAA GGGACATGTC GGATTGTGAT 
    ATGGATGATG CCGCCATGCC CGAGAGTGCT CTTTCAAGTT ATGGAGAAGC 
    TAATGATATG GATATTTTTG AAAGCACCAT GAGCTTATTG TCGGCTGAAG 
    TTCCACATCA GATGGGAGAA TTTCACCAGA GTTCTGAAGA TGTATTGATT 
    GACAATCAAG CAGCTGAGGA AGGGTATCAG AACTTTGAGG TGATCAGCCA 
    TCCATGCAAG CGCCTAAGGG TATCGGTCAA GAGAGAAAGC GGGGCGCACT 
    CCGAGGATGA GAGTGTTGCC CCCACAGTCT CTGTGAAGAA AGAAGCTCAG 
    GAAGAAGCCA CAACCAGCTT CGGTCTCCAG GCAGCGTTTT TTAAGCCCGG 
    CTACACAGGC AAGCGGAGAA GGAGGATGCC TAAAATTCAA AGACGAGGCG 
    GTTCATCCGC CTCTCCTTTT TCGTCTTGGA TTTCCTCTCG TATTCGTAAA 
    AAGCGGCAAT TCTAAGGGGG GACTAGCTAC CTCAGACAAT CGATCTTCCA 
    GTTTAGCTTC TGATCTGAAC TTTTAGTTAG ATGAGATGAT GACGGCAACT 
    GCAGTTCTTT TCCCTTTCTC TTTGTACCTG ATATATTAAC GATGACATAT 
    GAGCAATCTG GAAATGTGGC ACGATGGCTT CATC

    Gene models with high sequence identity

    1. AT3G59670.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); ...
      E-value: 4e-18; Score: 90.10

     

    InterPro Scan Digest

    See the detailed result >

    AT3G59670.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits to 77 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR