K03610

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03610

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03610

Determination of introduced cDNA(s)

  • J013110N20 - Rice Full-length cDNAs - Original: J013110N20

    full reading [+] show sequence

    Nucleotide sequence: J013110N20 - full reading
    GAGTAGTGTG AGGAGAAGAT GGAGTTTCTG TCATCAGTTT CATATCTTTT 
    CAAGGCTCTC TGCACATGTG GTGTTGCATT TGTCACTGGG TGGTTTGCTC
    ACTGGGTGTA CAGATGGATG AATCCCCAAT GCGATGGGAA GCTCCCTCCT
    GGCTCCATGG GCTTGCCTCT TGTTGGTGAG ACATTCCGCT TCTTTAGAGC
    GAGCGCATCT ATTGACATGC CGAGCTACTA CAAGGAAAGG CTCAAGAGAT
    ATGGGCCAAT CTTCAAGACA AGCCTAGTGG GGCAGCCTCT GGTCATTTCC
    CTCGATCCAG AGGTGAACCG GTTCGTGTTC CAGCAGGAGG GCAAGCTGTT
    CCGTAGCTGG TACCCAGAGA CGACGAACAC CATCTTTGGC AAGAAAAGCC
    TCACCACGTA TAGTGGTGCC GTTAATAAGT TCGTCCGGAG TTTCGCGTCC
    AAGCTCTTTG GCCCTACAAA CTTGAAAGAA TCACTCCTTC CTGAACTGGA
    GAGCGCCGTG AGGGAGAGCT TCGCGACGTG GGTCATGAAC CCCAGCATTG
    AGGTGAAGGA CGGCATATCG AATATGATAT TTGATCTGGT CGCTAAGAAG
    TTGATTGGCT TCAACCCCAC CAAGTCAAGA GAATTGAGGA AAAACTTTCA
    GGAGTTCTTC CAGGGAATGG TCTCTTTCCC CATATATTTT CCAGGGACAT
    CATTTTACCG ATGCATGCAG GTATATTTGT GTCCAAGTAG CTCAATGAGG
    AACCAATTTT TTGACTTTAT CAGAGAAAAC TAGATACTTC TCGAAATACT
    AATTAGGAGC TGACCCTTTA CCTATGAAAA ATGTTCTGAT TTTGTCGCCT
    CGACCTTCTG ATGCTTTTCT TTGTAGGGCA GGAGAAACGT GCATAAAACA
    CTGACTGATT TATTAAAAGA GAGGCTAAGT GCACCTGGGG AAAAATATAA
    TGATCTTATT GACCAAATTA TTGAAGAACT ACAGAGTGAA AATCCGGTGA
    TAGATGTCAA TTTTGCTGTA GATGTACTTT CTGCACTCTT ATTTGCCAGT
    TTTGCAACAC TATCATCGAC CTTGTCTGTC GGTTTTAAGT TTCTCACCGA
    CAATCCAAAA GTTGTCAAGG AGCTTAAGGT TTGTCCTTTG TACTCAACAA
    ACATTATATT GTTTTTTAAA ACTAGACTAC CTGCTTGTTT CATTAGGAAA
    GTTACAGCAG GAGAGGCACT TACAGGCACC TGCTTGTTTT GAAAGCATAC
    CAAATTCTAC AATCATAATC AAATCAATAA CCTAAACTAC AAATCAGCTA
    CCCAAAGAAA ATATATCTGA AACATTACAA GTCAAACATT TAAAATCTCA
    ATTGTATGTA AGAAACATAG GTTCCAAGGT TAAAATCTTT GAGGTACTAC
    ACTTTTTTTT TTGTTAAATT CTGTTACTTT CAGTATATCT TCGATGTACC
    TCACCTTTTA CCGCAAACAC CTAAAAGGTG AGGTACCTCC CAATAGCTAT
    AAAAAATCTC TTGAACAGTT TATGTCAATC CTGAGGAAAA ACATTTTTGC
    TTTGGTTGCA CACATCCGTC TTCACGTTAG TGTGCCAAAA GCTTAACTTG
    ACAGTGAAAG AGTAGCCATT AATTTACGCG TCAATAATTA TGTCATTCCA
    GGAGGAGCAT ACAACGATCC TGAACAAACG AGGCAGTCTG AATTCTGGGT
    TCACTTGGGA AGAGTACAAA TCCTTGATGT TCACTTCACA GGTTGTCCAC
    GAAATTACTC GAATTAGTAA CGTTGCACCT GGAATTTTCA GGAAAACCCT
    AGCAGATGTG AAAGTGAAAG GCTATACAAT CCCAGCTGGG TGGCTAGTCA
    TGATTAGCCC CATGGCAGTT GATCTAAACC CAACATTGTT TGAAGACCCA
    CTCGAATTCA ATCCATGGAG GTGGACGGAC AAGACAAAGC AGAGTGAGCT
    ACTAAGGAAT TACATGCCAT TTGGAGGAGG CATAAGACTC TGTCTCGGGG
    CAGAGTTTAG CAAGCTTTTT ATTGCCCTTT TCATCCACGT CTTGGTGACT
    GAGTACAGAT GGAAAGAGAT CAAAGGAGGT GATGTACTGC GCATCTCAGA
    GGTTATATTC CCACAAGGCT ATCATATCCA ACTTATCCCT CATACCTAAT
    TAAAATTGTG TCAAGGGAAT TGTACCCAAC ACTTTCTTGT GAGCAATGTA
    AAGCGTTATG ATTGGGTACA GTCAGTGAGT TTCTGTGAAT GCATTTGTGT
    AATAAGCAAG ATCAGCGACA TAACAGAGTT GCTAGGGTCG GATTACATCC
    TTACCACAAC ATCGACTCTG AGCACCCGGC TACCTATGAG TACTACCTTC
    ATTTTATTTG G

    Gene models with high sequence identity

    1. AT1G12740.1 [+] show detail - cytochrome P450, family 87, subfamily A, polypeptide 2
      E-value: 8e-66; Score: 249.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther CYTOCHROME P450 PLANT 6.5e-88
    HMMPanther Cytochrome P450 6.5e-88
    HMMPanther CYTOCHROME P450 PLANT 9.2e-77
    HMMPanther Cytochrome P450 9.2e-77
    HMMPanther CYTOCHROME P450 PLANT 6.1e-22
    HMMPanther Cytochrome P450 6.1e-22
    HMMPfam Cytochrome P450 1.1e-09
    HMMPfam Cytochrome P450 1.3e-05
    HMMPfam Cytochrome P450 2.4e-36
    PatternScan Cytochrome P450, conserved site 0
    Gene3D Cytochrome P450 8.7e-22
    Gene3D Cytochrome P450 5.3e-05
    Gene3D Cytochrome P450 9.1e-36
    superfamily Cytochrome P450 1.4e-26
    superfamily Cytochrome P450 1.4e-08
    superfamily Cytochrome P450 2.3e-41
    FPrintScan Cytochrome P450, E-class, group IV 8.4e-14
    FPrintScan Cytochrome P450, E-class, group IV 8.4e-14
    FPrintScan Cytochrome P450, E-class, group IV 8.4e-14
    FPrintScan Cytochrome P450, E-class, group IV 8.4e-14
    FPrintScan Cytochrome P450, E-class, group IV 8.4e-14

    See the detailed result >

    AT1G12740.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 87, subfamily A, polypeptide 2
    Curator Summary
    encodes a protein with cytochrome P450 domain
    Computational Description
    "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1); Has 31076 Blast hits to 30988 proteins in 1655 species: Archae - 56; Bacteria - 5533; Metazoa - 10873; Fungi - 5392; Plants - 7791; Viruses - 3; Other Eukaryotes - 1428 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR