K04234

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K04234

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K04234

Determination of introduced cDNA(s)

  • J033029L21 - Rice Full-length cDNAs - Original: J033029L21

    full reading [+] show sequence

    Nucleotide sequence: J033029L21 - full reading 
    GACTACTACT ACTCCGTCCT CCTCTTCACC GGTTAGATCG GCGGCGGCGG 
    CGGCGATGAT GAGGGCACGG TGGGCGGCGG GGATGCTGCG CCGCGCTAGC 
    TCTGGCGAGG CTTCGCTCGC CGCGCGCGCG GTCTTCGCGC GCGGCTTCCT 
    CGGCCTCAAC ATGAAGGCGA GTAAGGAGAC CATCGAGAAG AAGGAGAAGG 
    ATAAGGCCAG GCTTATGGAT GAAATGAGCA GGGGGTACTT CGCCGACATC 
    GCAGAGATAC GCAAGAACGG CGGCAAGCTT GCGACAGCGA ATAAGATCAT 
    CATTCCGGAA ATCGCAGCCG TGAAGTTCCC TGATCTTTCT GTGAAGTCCC 
    CTGATGGCAG GACAGTGAAT TTGCCGCTTG TCGCACCTCC GCGAAACGAT 
    GATCCCCAGA CTGGCAATAC AGTGGACACA CAAAATGATG ATTGTAAGGC 
    TGGTGATATG GTGGTTCCTG ATGCTTCATT GGTGTGCCTT TCCTTTCGCG 
    CAAGCTCCCA GAAAATGGCA GAAACGTGGA GCCTACCTTT TCTTGATGCA 
    TTTAGTTCTG CTGGGAATAT TCAAGTGTAT GAGGTCTCAT TTATTGATTC 
    ATGGCTGTTA TCATCAAGTC CTGTGAGACA AGTATTCCTC AAGGTGATGA 
    CAAAATCCAA CAATCCACAG AGACATGCTG TATATGCCTT TGGTGACCAC 
    TATTATTTCA GGAAGAAGCT TCATATCCTT AACCTTCTTA CTGGGTACAT 
    ATACCTGGTT GATCGCCTCG GAAGAGTGAG GTGGCAAGGT TTCGGATCTG 
    CGACGCAGGA AGAGTTGTCA TCGCTAACTG CATGTACCTC CATTTTGTTA 
    GATGGAAAAT GAGATTTAGA TGGATACTGA AATATTTGGG GTTGGAGAAA 
    TTTTGTCATT GCGAATCCAT AGCTGTATCA CCTCTCGTTT CAGCATATTG 
    AGGGATGATT TTTTTTCCTC GCGGTTAATA AGCGTAAATT GGATTG

    Gene models with high sequence identity

    1. AT1G08220.1 [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synt...
      E-value: 1e-62; Score: 237.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    HMMPfam ATPase assembly factor ATP10, mitochondria 1.1e-68

    See the detailed result >

    AT1G08220.1

    Model type
    Protein coding
    Computational Description
    FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitochondrial proton-transporting ATP synthase complex assembly; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase assembly factor ATP10, mitochondria (InterPro:IPR007849); Has 168 Blast hits to 168 proteins in 86 species: Archae - 6; Bacteria - 0; Metazoa - 2; Fungi - 107; Plants - 30; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR