K04607

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K04607

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K04607

Determination of introduced cDNA(s)

  • J023109P12 - Rice Full-length cDNAs - Original: J023109P12

    full reading [+] show sequence

    Nucleotide sequence: J023109P12 - full reading 
    GATCATTATA TTCCAAACCA TGGTTAAGGC CTACATTGCC ATCTTCTCCA 
    TCGCCGTTCT CTTGTTGATT CACTTCCTCT TCCGCCGCCG CGGCAGGAGC 
    AATGGCATGC CGCTGCCTCC GAGCCCTCCA GCCATCCCGT TCTTCGGCCA 
    CCTCCACCTC ATCGACAAGC CGTTCCACGC CGCGCTGTCC CGCCTCGCCG 
    AGCGCCACGG CCCGGTCTTC TCGCTGCGCC TCGGCTCGCG CAACGCCGTC 
    GTGGTGTCGT CGCCGGAGTG CGCCAGGGAG TGCTTCACGG ACAACGACGT 
    GTGCTTCGCC AACCGCCCCA GGTTCCCGTC GCAGATGCTC GCGACCTTCA 
    ATGGCACCTC TCTAGGCAGT GCCAACTACG GCCCGCACTG GCGCAACCTC 
    CGCCGCATCG CCACCGTGCA CCTCCTCTCC TCGCACCGCG TCAGCGGCAT 
    GTCTGGCATC ATCTCCGGCC AGGCGCGCCA CATGGTGCGG AGGATGTACC 
    GCGCCGCCAC CGCCTCCGCC GCCGGCGTCG CGCGCGTCCA GCTGAATCGG 
    AGGCTGTTCG AGCTCTCGCT CAGCGTCCTC ATGGAAGCCA TAGCCCAGAG 
    CAAGACGACA CGTCGTGAGG CGCCGGATGC GGACACGGAC ATGTCCATGG 
    AGGCCCAGGA GTTGAGGCAT GTCCTCGACG AGCTCAACCC GCTTATCGGC 
    GCGGCCAACC TGTGGGATTA CTTGCCGGCG CTCCGGTGGT TCGACGTGTT 
    CGGCGTGAAG CGCAAGATCG TGGCGGCGGT GAACAGGAGG AACGCGTTCA 
    TGCGCCGGCT GATCGACGCG GAGCGGCAAA GGATGGACAA CAACGATGTC 
    GACGGCGGCG ATGATGGCGA GAAGAAGAGC ATGATTTCCG TGCTGCTTAC 
    TCTGCAAAAG ACTCAGCCAG AGGTCTACAC GGATACTCTG ATCATGACTC 
    TCTGTGCGCC ATTGTTTGGT GCCGGAACAG AGACTACATC AACCACAATA 
    GAGTGGGCGA TGTCACTTCT ACTGAACCAT CCAGAGATTC TAAAGAAAGC 
    ACAAGCAGAA ATAGACATGT CCGTCGGAAA CTCTCGCCTA ATCAGTGTCG 
    TCGACGTGCA TCGTCTGGGC TATCTCCAGT GCATCATCAA CGAGACGCTT 
    CGCATGTACC CTGCAGCGCC ACTTCTGCTA CCTCATGAAT CATCTGCGGA 
    TTGCAAAGTC GGTGGCTACC ACATCCCAAG CGGAGCGATG TTGCTTGTCA 
    ACGTGGCTGC CATCCAAAGA GACCCAGTGA TTTGGAAAGA GCCAAGTGAG 
    TTCAAGCCAG AGAGGTTCGA GAATGGCAGG TTCGAGGGAT TGTTCATGAT 
    ACCGTTTGGG ATGGGGAGAC GGAGGTGTCC CGGGGAGATG CTGGCATTGC 
    AGACAATTGG GTTAGTTTTG GGGACTATGA TCCAGTGCTT TGATTGGGGC 
    AGAGTTGATG ATGCTATGGT TGATATGACA CAGAGCAATG GACTGACTAG 
    CCTCAAGGTC ATTCCGTTGG AGGCCATGTG CAAACCACGA GAAGCTATGT 
    GCGATGTTCT TCGGAAATTC ATGTGAAGCC ATACACGGCT GTGTAGCAGG 
    GAATAAAGTT CTGGTGACTA TATACTCTCT GTCCAAACAA AACCTAATCT 
    TGTATCCAAA TTTATCTCTA GGATTAGATA TTTATTGGGA CAAAGGGAGT 
    GGGAAAGACA GAAGCTATAC TTAGTCATTT AAACAGAAGG GAATAAGATA 
    GTCGTGCAGT GTTCGTCAAA CAATGTACAC ATCATTTTAG CACAAAAGCT 
    GCTCGTGGAA GCTATAACCA CTATCCGAAA ATATACCTAT CTTGCTGGTT 
    CAAATTAGTA GCTATATTTT AGATCCGAGG GAGTAAATTT CCACTGCATG 
    TTCTCG

    Gene models with high sequence identity

    1. AT4G37330.1 [+] show detail - cytochrome P450, family 81, subfamily D, polypeptide 4
      E-value: 1e-102; Score: 370.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Cytochrome P450, conserved site 0
    superfamily Cytochrome P450 1.7e-121
    HMMPanther CYTOCHROME P450 SUBFAMILY 81D 2e-150
    HMMPanther Cytochrome P450 2e-150
    HMMPfam Cytochrome P450 1.1e-89
    FPrintScan Cytochrome P450, E-class, group I 1.5e-51
    FPrintScan Cytochrome P450, E-class, group I 1.5e-51
    FPrintScan Cytochrome P450, E-class, group I 1.5e-51
    FPrintScan Cytochrome P450, E-class, group I 1.5e-51
    FPrintScan Cytochrome P450, E-class, group I 1.5e-51
    FPrintScan Cytochrome P450, E-class, group I 1.5e-51
    FPrintScan Cytochrome P450, E-class, group I 1.5e-51
    FPrintScan Cytochrome P450, E-class, group I 1.5e-51
    FPrintScan Cytochrome P450, C-terminal 6.2e-15
    FPrintScan Cytochrome P450, C-terminal 6.2e-15
    FPrintScan Cytochrome P450, C-terminal 6.2e-15
    FPrintScan Cytochrome P450, C-terminal 6.2e-15
    Gene3D Cytochrome P450 2.2e-115

    See the detailed result >

    AT4G37330.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 81, subfamily D, polypeptide 4
    Curator Summary
    member of CYP81D
    Computational Description
    "cytochrome P450, family 81, subfamily D, polypeptide 4" (CYP81D4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 5 (TAIR:AT4G37320.1); Has 36638 Blast hits to 36468 proteins in 1879 species: Archae - 61; Bacteria - 6348; Metazoa - 11702; Fungi - 7393; Plants - 9479; Viruses - 6; Other Eukaryotes - 1649 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR