K04612

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K04612

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K04612

Determination of introduced cDNA(s)

  • J013159I12 - Rice Full-length cDNAs - Original: J013159I12

    full reading [+] show sequence

    Nucleotide sequence: J013159I12 - full reading 
    GGCCGCCGGT GGCTTACGAA ACAAGAACAG AAGCCTCCTC CTCTCTCTTC 
    TTCTCCCATC CCCCCTCCCC GATCCTCTCG CCCACCTCCA GATTCAAATC 
    TTGCGAGCAG TTTATCCCTC CATTGGATTT GATCCAGTGA CGTCCTAACA 
    ACCCGGCTGG CTGGTGGAAG TGGAGTTTGA GAGCTTGCTT GTCCTGAAAT 
    CACGCCTCCT TCGTCTCGGG CCGGGTTTCG TTGGTTGGTT TCTTGGTTCT 
    CGAGCCAATG GAGGAGAGTT CTTGCAGATT GGAGTAAAAA AAGATCTTAT 
    GTACTAGTAG TGGTGGCTAG TGAGTGATCT GGGTTTCGTT CGGTTTGTTT 
    TGTTTCGCCT CCCCCCAATT TGGTGCTTTC GGTGTCTGTG CGAAGCGTGT 
    TGGGATGACG AACCGATTGG ATTTCTTGTG AGCGACTACT CCTGATTGTT 
    TCGTTGTTGA TTCGCCTTTA TTTCATTGAT TAGAGTGGAA AAAGGGCTTA 
    TCGTTTTTAT TTTTTTTGGC TATTTGTGAG CAATTTTTTG TTCTCCTCCA 
    TCTAGCATGT TTGTTTGTTT GTAATTGCTT CAGAAGGCGG CGAGTTTGCT 
    TAATTTTTGG TAGAAAATTT ATCTTCATTG GATCTATAGC TATAGCGAAG 
    ATTTGGATTC TTGAGGGAGA TTTTTTTTTG TTTAAATTCT TGTTGGATCC 
    GGCGATTTTT GTCCGGATCA AGAAGAAGGG GAGAGAAATC TTGGCTCCTA 
    GCGGCCATGG GGCTGAGCCG CTTCTCCGAC TGGATATGGC CGGGGAGTAG 
    AACCACCCGG CGAGCTCGCG ACGCTCCGGC GAGCAGCGTG GCCTTGGCCG 
    TGGCCGGCGC GCTGTTCCCG GACTCCCCCT CCGGGTTCCG GGAGCCGACG 
    GTGGGCACCC TCAGGGGCCC GGCGAGCTCC GGCGGCGGCG CTCGACGCGC 
    CCGGAAGGGG ACGAGCCGGC GGCGCAGCCG TGAGGTGGTC GACAGGGAGC 
    ACGACATGGT CGTCGTGCCG CTCGGCGGCG GCGGCGACGG GTACTCGTCG 
    GACTCGGGCT CCGACGACTC CGACTGGTCC ATCGGCTGGC TCGAGCCGCA 
    GGGGCCGGAG CTCCACAGCG ACGGGGATTC CGACGGCAGC TTCGCCGTCC 
    TCGTGCCGTG TTACCGCCAC GGCCGTTGCC GCGTCGAGGA GCCCGGCCGC 
    GGTAGGCTCG CCGACGGCAA CGTTTCCGGT GGCAAGAATT TTGTAGAGCG 
    CTGGCTTTCT TCTCTTCCAA ACTGATTATT TATCCATTCT TCTATGGCTT 
    CGTTATCTTT AGCATTTTTA TGTCTCTCGT ATTTGTAAAT ATATCGATGA 
    AGACATGAAC CCCAGAAAAC ACCCAACAAA AAAGAAGATT AAAAGTTGAG 
    GAGCAGTGGA CCGAGATTCC AACGTTAAGG TACTCTTGCA GTGTACTAAG 
    AGTCATGAAA ACGAAAGATT ACTGCCACGT GCTGACAACC TGAAGTTGAA 
    TCGACGAATT GTTAAGATTA CCATTGATCT ACTTGCTTCG GGATGTTTAA 
    TCTACCTGTA TATGATGGCA GTTTACCTCA TTTGTGTGAC TGAAATTCTT 
    CTGTACATAT ATGAAGGCAG AAACATTTGA GATGAACTCC AATGAGAATA 
    TGCATTTCTT CTGTATATAT AATAAACGAT TGTCCGTATG TGTC

    Gene models with high sequence identity

    1. AT4G38060.2 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); ...
      E-value: 4e-09; Score: 60.10

     

    InterPro Scan Digest

    See the detailed result >

    AT4G38060.2

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR