K04639

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K04639

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K04639

Determination of introduced cDNA(s)

  • J033114E24 - Rice Full-length cDNAs - Original: J033114E24

    full reading [+] show sequence

    Nucleotide sequence: J033114E24 - full reading 
    TACTGTGCAG AGGGGGAAGC TGTTTAGCCA TGGCCTCCGT CTCCATCTCC 
    TACCTCGGGC CCTGAGCACA TCCCCATTCC CCTAGCCTCA GCTCCTCCAT 
    GCGAGGGCGG TGATGGCGCC CGCCTCCGTC GCCGTCTCCC TCTCCTTCCG 
    CGTCGTCCCG CCTCGGCCCT GCCGCCGGCG GGCGAGGTGG CCCCGGCCAA 
    TTAGGGCTTC GAGCGACGGT AGTGGCGTCG CAAACGGGGA CCGGAAGGTC 
    GGGGCTCTGG AGAGGAGGGT GGGAGATCTG AGGGCTGTCG TCGCCTCGGT 
    GCCCCCTGCT GTTGCTGCGA TCAAGAAAAA CATTGGACTA AACTTTATTG 
    CTGGATTCTG TCTCGGCATC ACACTTTTGG CTGCTGTTGC AAGACAGGTC 
    ATCATTAGGA TTCATGAGCG TGACAATAAA GGCTCTGTTG CTGACCTAAT 
    AAGGCGTGGA CAATTAAAAT CAGGACAACG TGGGATAGCA AAACCCCGAG 
    TGTACGATGA TCCTTTCAAT AATCCATTAG TCAAGATTGA TGAGGATACT 
    TCTACCGCTC AAGTGTTTGG CAAGGAGTAC CGGCTTGCTC CCATTAGGCT 
    TACAAAAGAA CAACAAGCAA TGCATCAGAA AAGGAGATCA CGTACGTATC 
    AGTGGAAAAG GCCCACTGTT TTTCTTAAAG AAGGTGATTC CTTGCCACCA 
    GATGTTGATC CAGATACAGT TAGATGGATT CCCGTAAACC ACCCATTTGC 
    TGCTGCTTCA ACTGAAGTGG ATGAGGAGAC TGCTAAACAA AATGTTTATC 
    AAAAGGATGG GGTCCCATCC CGTGTCAAAG CTGAGCATGA AGCTTTGCAG 
    ACAAGGCTAG AGGCTTCAAA TAATGTTAAC AAGTTCTCTT CTAGCCAAAG 
    GAATATGCAG CTTAGTGACA GGCAACTAAG ATTATCATCA AACGAGTCAT 
    CTGGGAGTCG GCAAAACTCG TTATCTGGCA CAGTGAAGAA CCAAAATGGT 
    CAACCAACCT TGGAGTCTGA AAAGCGTAGC CCTGACAACA ACTCACAATC 
    AAAAAGTCTG GAAGAACAAT AAATTTGTGA TTTGTGTCAA CTCCTTAGCA 
    CCTGCTTCAA CAGCTTGTCA GCTTCGTTGT GTAGTGTACT GAGGACTCAG 
    GTTTTAGCTG TTGATAGAAG AATTTTGGAC CTGTAGGCTT ACGTAGTGAC 
    TTGAGCATAG GGCATTGCTA CGGAATGTAT TTCGTATGTT GTAAAGGGAT 
    GGGCATGAGC ATAGGGCATT GCTACGGAAT GTATTTCGTA TGTTGTAAAG 
    GGATATTTTC TTTCTCT

    Gene models with high sequence identity

    1. AT1G20830.1 [+] show detail - multiple chloroplast division site 1
      E-value: 1e-61; Score: 234.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G20830.1

    Model type
    Protein coding
    Short Description
    multiple chloroplast division site 1
    Curator Summary
    Encodes MCD1 (MULTIPLE CHLOROPLAST DIVISION SITE 1). Determines the site of chloroplast division in concert with MinD (AT5G24020).
    Computational Description
    MULTIPLE CHLOROPLAST DIVISION SITE 1 (MCD1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast fission; LOCATED IN: chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 38 Blast hits to 38 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR