K06241

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06241

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06241

Determination of introduced cDNA(s)

  • J023144O03 - Rice Full-length cDNAs - Original: J023144O03

    full reading [+] show sequence

    Nucleotide sequence: J023144O03 - full reading 
    GGTCCCGCGC TCTCTCCTCC CCTCCTCGAC GAACAGCAAG CGCGCGCGCT 
    CTCATCTCGA GATCGTAGCT GAAGATTACA CATTGGGAAA CTGGTGTACT 
    GCCTGCCTCT GCGATCGATC GATCGATCGA TCGCCATGGC TGACGCGAAG 
    GGCGACGAGG TGTTGGCGGA GGGACAGATG CCTCTGGGAC GGTGGCCGAT 
    CCTGTCCTAC GGTGTCGGCC ACATGCTGAA TGACATCACG TCTGCCTGCT 
    GGTTCACTTA CCTGCTCCTC TTCTTGCAAG AAATCGGGCT TGCTCCAAGG 
    GATGCAGCTA TTGTGATGCT TTCTGGCCAG GTTGCAGATG GCCTAATGAC 
    GATTCTTGCA GGCGAGATGA TCGACCGATT TGGGCACTTC AAGCTGTGGC 
    ACATCGGAGG ATCAATCCTA GTCGGCATCT CCTTCTCCTC TGTCTTCGGT 
    GGATGTCTTC TCTGCACCGT CCTGGGGACC GATTCCTACC TTGTGAGAAC 
    CATTGGTTAC AGCTTCTTCG CTGCCGTCTT CAACATCGGC TGGGCGGCCA 
    CACAAGTTTC ACACATGTCA ATGGTGAACT GCATGACACT GAATTCCACA 
    AGCCGGGTAG CCTTAGCAAG CTGCAGAAAT GCGTTCACTA TGGTGGCAAA 
    TCTTGGTTTA TATGCGATAG CTTTGGTTGT ATTTGCTTTA GTGAGCGCGA 
    AGGCATGCTC AGACATTGTT CTTCAGTACC GTTGGATAGC GTACGTTTCA 
    ATTTTTGTGG GATGCTGCTT CCTAGTGGTG TTCTATGCTG GAACAAAGGA 
    GCCGACTTTG CAGTCGGGAT CTGACTGCAA GAAATCGGCT AGGATTTCCT 
    GGGGCTACTG GTTCAAGAAG GCCTTGTACT ACCAAGTCGC TCTGTTGTAT 
    ATGCTTGCAA GATTGATCAC AAATGTCTCT CAGTCTCTCA TCGCGTTCTA 
    CGTCACTAGA GACTTGAAGA TGAATGAGTA CTCCAAAGCG ATTATACCAG 
    CCATCATATT TTGCTGCAGC TTCCTCGTCT CTGTTGTTCT CCAGGAGATA 
    AAGTGGAACA GCCGCCGCCT GAAGTCGCTC CTCACCATCG GAGCAATACT 
    CTGGGTGATC GCTGGAGCCG CCGTCTTCGT CCTCCCGAGT CAGATGCACA 
    ACCTTATGTA CCCTCTCGCT ATGGTCATCG GAGCTGCAAA CGCCCTCGTC 
    ATGGTGACCA CAATTGGGCT AGAGAGCGCG CTGGTAGGAG ACGACTTGAA 
    CGGCTGCGCC TTCGTCTACG GCTCGCTCAG CTTCCTGGAC AAGATGTCGT 
    GTGGAATCGC CTTGTTTGTT CTAGAATCAT ACGAAGATTC GATTAGCTGC 
    GGCGAGACGA GGGGGCTGTA CACGGTGAGC AGGTTTGGGA CAGGTCTGAT 
    CCCCTCGTGC TTTGCAGTCT TCGCGCTGCT GGTCACCTCA ACCCTGAAGC 
    TCCAGGACAC CAACCCGAGA GCTGCCGCCG CTGCACTGGA AGCTCCACTC 
    CTCGTCTGAA GCACGCCTCC GAGTGTGCTT CTCTTAAACT ACAGGACACC 
    AGAAAAATCG ACTGTATGTA TCACTGTATG TATCACGGGA AGAAGAAGAA 
    GAACATACAT AAGATGAAAT TGCATTGCAG AACCCTCTTC AGTTCGGTCT 
    GAAGAGGTAA GCTGCAGTCT GAAGAGGTAA GCTGCAGCGT GATAGTGTCT 
    AGTAAGATTC AGAATTCTGG CCCGAATCTT AAACCTTCGA TGCTTGTAGG 
    CAGTTAGAAA TGATCTAATC AGCTCTGTTA CTGCTTCTTT TCAATTAGAT 
    TTGAAAAGGT CCAATGCTTG TAGCAATCTG TACCAGTGTT GTATCAAAGA 
    TTCAGTTTCG AGTGAGGTTT CCGTGGAAAA CAGCAAAAGA TTC

    Gene models with high sequence identity

    1. AT3G60070.1 [+] show detail - Major facilitator superfamily protein
      E-value: 2e-153; Score: 540.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G60070.1

    Model type
    Protein coding
    Short Description
    Major facilitator superfamily protein
    Computational Description
    Major facilitator superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G44280.2); Has 1328 Blast hits to 1310 proteins in 435 species: Archae - 0; Bacteria - 1041; Metazoa - 121; Fungi - 3; Plants - 58; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR