K06644

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06644

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06644

Determination of introduced cDNA(s)

  • J013042A17 - Rice Full-length cDNAs - Original: J013042A17

    full reading [+] show sequence

    Nucleotide sequence: J013042A17 - full reading 
    ACGAGAATGG TGGCGAGAAG AATATGCTGA TGAGCTTGCG AAAAAGCAGA 
    AACGACGTGC ACTTGCTAAA TCAAAGAGCG AGCAGGCAGG GTTGCAATGG 
    TGGGAGCGGG ATATTGACGA TGACTTGGAT GCAAAGGGAC GATCCAAATG 
    GAGTATGATG AAGAGCTGGA GTCGGAGAAG CAATGGCAGC ACTGGCAATG 
    GCAATGGCAA CGGCAATGGC AGTATTAACT GGTGGGTCAA TGGTGCAAGA 
    AGCACCCGTG ATTGGGCAAG TGGGGAATTC GTTCCCAAGA GTAGTGGCGC 
    GGTGAGCAGC ACACCGAGCA TGCGCGGCAC GGTGTGCTAT GTGGCTCCTG 
    AATACGGTGG TGGTGGTCCT TTGTCTGAGA GATGCGATAT CTATAGCTAC 
    GGTGTCTTGC TACTGGTACT TATCTCAGGA CGCCGGCCGT TGCAAGTGAC 
    GGCCTCACCC ATGTCTGAGT TTGAGAAGGC AAGCCTCATA TCGTGGGCGA 
    AACATCTTGC GCGCGTGAGC CGCTTGATTG ATCTTGTTGA TCCAGCCCTA 
    CAGGATGTGA ACCGTGATGA GGTTTTACTC TGCATTACAG TCGCACTCCT 
    TTGCATCCAA AGGTCTCCAG CTCGTCGACC ATCAAGTGAG GAGGTACTCC 
    GAATGCTGTC TGGCGAGGGA GAACCTCCGC ACCTCCCATT GGAGTTCTCA 
    CCGTCTCCAC CTGGTGGGTT CCCTTTCAAG TCCCGAAAGA AAGTTCGGTG 
    AGTTTGTTTA GCTCTTACCT AGATGCAAAA GGTAGCTTTA ACTTTGTCCC 
    TTAATGTATG TCTCTTTTGG TTCAAGTTCC TATTTTATGT ATTCTTTTAC 
    TCACTACTGT ATAAAGTTCC CTAGGGAAAA AGGTAATGCC GACCTGAACT 
    CAAAATTGAC AACAACATTG CCTAATTGAT C

    Gene models with high sequence identity

    1. AT2G45590.1 [+] show detail - Protein kinase superfamily protein
      E-value: 4e-54; Score: 208.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine/threonine-protein kinase-like domain 6.4e-07
    Coil coiled-coil 0
    superfamily Protein kinase-like domain 2.5e-18
    HMMPanther RECEPTOR-LIKE PROTEIN KINASE 3.4e-69
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 3.4e-69
    Gene3D no description 1.7e-16

    See the detailed result >

    AT2G45590.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G25390.1); Has 91863 Blast hits to 73683 proteins in 3539 species: Archae - 59; Bacteria - 6920; Metazoa - 25471; Fungi - 5140; Plants - 45446; Viruses - 121; Other Eukaryotes - 8706 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR