K06904

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06904

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06904

Determination of introduced cDNA(s)

J023039L13 - Rice Full-length cDNAs - Original: J023039L13

full reading [+] show sequence

GTCCCCCTCC GTCTCCAGAT CTCCCCCCAC CCACATTCCC CAGCACCTGT 
CTTGCTCCGG TCCATGTAGA GCACCCCGCC TTGTCGGAAC CGCGAGCTCG 
AGGAGAGAGA GATGGGGGCG GAGACCGGCG AGCCCAGCTC CTTCCTCAGC 
TTATCTGCTG CCTTCTCCTA TGGAATTGCA TCTATGGCAA TGGTATTCGT 
GAACAAAGCA ATTCTTATGC AGTATGCTCA CTCAATGACT CTTCTCACCT 
TACAGCAAAT AGCTACAGCA CTTATCATAC ATTTTGGTCA AATTCTAGGA 
GTGTCTAAAA GAAAAGATTT CAGTATGGCA ACAGGAAGGA AGCTTCTTCC 
GCTGTCGATC TTCTACAATG CAAATGTTGC ATTTGCGCTG GCAAGCCTAA 
AAGGGGTTAA CATTCCTATG TATATTGCAA TTAAAAGGCT CACTCCCCTT 
GCTGTACTGG TGGCTGGGTG TTTACGGGGA AAGGGGAAAC CACCAACACA 
GGTGTCCCTT TCAGTCATCT GCACGGCCGC TGGAGTCCTT ATTGCAGCTC 
TTGGAGATTT TTCCTTTGAC TTGTATGGAT ACTCCATGGC TCTAACATCA 
GTCTTCTTCC AGACAATGTA TTTGATTCTT GTGGAGAAAT CAGGAGCAGA 
GGATGGTCTT TCCTCCGTTG AGTTGATGTT TTATAACAGC GTATTATCAC 
TACCCTTTCT GTTTTTCATC ATTATAGCAA CAGGAGAATT CCCCTATTCT 
CTTTCAGTAC TCTCTGAAAA GACGGCCTCG CTAACATTCA GTGCTATTCT 
TCTTGTTTCG CTGGTGATGG GTATCGTCCT GAATTTCACC ATGTTTTGGT 
GCACGATAGT GAACTCCGCT CTGACGACAA CAATAGTAGG AGTTCTCAAG 
GGTGTTGGAT CTACTACCCT GGGTTTCGTT CTGCTGGGAG GTGTGGAAGT 
GCATACTCTC AACGTTACTG GATTGGTGAT CAATACATTT GGAGGTGTCT 
GGTATTCATA TGCGAAGTAT ATGCAGAAGA GGAAGATGCC AAAGAGGATT 
GCACCTGATG TAGAGGCACA TCCTCACAAG TAACATCATT CAGTAGCTCT 
GAAGCATAGA TATAGTAGCT ATGTAGTTAA GCTTCATTCT TTAAGCAGAT 
AAATTATTGA AATGCCATAC CAGTTCCAAT CCAATTTTTA CCTGAACTCC 
CATTCTAACA TCAGCAAAAT AGCTGGTGCA GTGAAGGAAG CTAATTAACT 
TTTTTTTTTG TGAAAGACCA GTTGATCACC TGGCTGTAGT GTACTCCAAT 
ATCAGTCCCA GTAATTCAAT AGTAGTAATA CAGGTTTCGC ATGG

Gene models with high sequence identity

AT4G31600.1 [+] show detail - UDP-N-acetylglucosamine (UAA) transporter family
E-value: 1e-122; Score: 436.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	UAA transporter	5.4e-09
HMMPanther	SOLUTE CARRIER FAMILY 35	4.6e-60

See the detailed result >

AT4G31600.1

Model type: Protein coding
Short Description: UDP-N-acetylglucosamine (UAA) transporter family
Computational Description: UDP-N-acetylglucosamine (UAA) transporter family; INVOLVED IN: transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: Nucleotide/sugar transporter family protein (TAIR:AT4G32272.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR