K06946

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06946

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06946

Determination of introduced cDNA(s)

  • J023110G09 - Rice Full-length cDNAs - Original: J023110G09

    full reading [+] show sequence

    Nucleotide sequence: J023110G09 - full reading 
    GGCTCGCTCG CACACAGTCC CCAATGGCCT CCCGGAACGC CGACCCGCCG 
    CGTCACCACC CCTCGACGCC GCCTCTCCTC CTCGCCATGC GCCACCTCCC 
    ATTCCCGGGC GTCCACCGGC CGCGCGCGCT CCCCGCCCCG GACCTCGCGC 
    CCCTCGCCGC CCGCCTCGAA GAGCTCGCTG CCGCCGCGGC CGCGCACCCG 
    CTCCTGAAGC CGCTCTTCGC CTTCCACTCC CACCTCGCCG CCTTCTCCCA 
    GAGCAGGAGG CGGGCGATGG CGACGATGCG CCGGCGGCGG ACGACGGGCG 
    AGTGCCCGCT GTCCGGCGAG CACTGCTTCG CGGCGGTGCT GGGTGACTCC 
    GTGGCCGGTG TGGTGGTGTC CAGCGGCATC AACAACTTCC TCAGCCTGTA 
    CAACACCGTC CTCGTCGTCA GGCTCGTGCT CACCTGGTTC CCCAACACGC 
    CGCCCGCCAT CGTCGCGCCC CTCAGCACGA TATGTGATCC GTATCTGAAC 
    ATTTTCCGGG GAATCATCCC GCCGCTGGGG GGAACGCTCG ACCTGTCGCC 
    CATCCTCGCG TTCCTGGTCC TCAACGCCTT GTCCAGCACC GCCGCCGCGC 
    TCCCGGCCGA GCTCCCGGAC CCAGCACCGC CGACGTCTCG CGGCGCAACC 
    TCGTCAAGCT CCGTGCTCAC CGCAAACCGG AGGAAATGGA TGCGGAGAAT 
    CCGCCCGGTA AAATCGCAGG AAGGAGAGGA GGAAATGTGA TGCTCTATCT 
    AGGTGGGACT TCGTTTGAAC CAGTTTGGAC AGATGGAATC GCTGTCTCAC 
    TGACATGGTG GCCATCAGAC TAAGAGTCTG GGCATGTTCA GACGCGAACG 
    ATCATCAATT AAGCAGGCGG AATTGTTTTG GTTGTGTTGC TTCAGAAGAT 
    TTTTGCTTGT ACGCTGTAGA ATCCATCCCA TTGAGGCTTC GTGTTTTCTG 
    CATGTATGCA GAGGAACAAC CTGCTTGACT AGTTTGACAT GTTCCAGTCT 
    TTTGGATGAG TTTGTTACTT TGTTGACG

    Gene models with high sequence identity

    1. AT5G21920.2 [+] show detail - YGGT family protein
      E-value: 5e-28; Score: 122.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G21920.2

    Model type
    Protein coding
    Short Description
    YGGT family protein
    Computational Description
    YLMG2; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; CONTAINS InterPro DOMAIN/s: Protein of unknown function YGGT (InterPro:IPR003425); BEST Arabidopsis thaliana protein match is: YGGT family protein (TAIR:AT4G27990.1).
    Link
    InterPro Scan - TAIR