K07516

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07516

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07516

Determination of introduced cDNA(s)

  • J013166D14 - Rice Full-length cDNAs - Original: J013166D14

    full reading [+] show sequence

    Nucleotide sequence: J013166D14 - full reading 
    CCTGATTCAT CGTTCATCTC CGGCTCTGGC CCTGCAAACT AAGCTGCCAT 
    GGCGATTCCT GGTTCGTTGT TCTATCGCTC ACCCGCGCTT CAGGTCATTT 
    ATGTCTTGTG CGTGCTTGCG GTTCTTGTCC CAGATGCAGG TGGGCGGCGG 
    CATCATCAGA TTCAGCTTCA GCCTGAGTGT CCTACGTTCA CCTGTGGCGC 
    CCATCTCAGG AACGCGTCGT ACCCGTTCCG CCGGCGAGGT GACCCGCCGG 
    AGTGCGGCGT TGCGTCGTAC GAGCTGACTT GCACCGATGA CAAGGCTATT 
    ATTCAGGTCG ACAACGGAAC GTACCTTGTG AGGGGAATCA ACTACACCGA 
    TGCTACCTTC AGTGTCGTGG ACGCCAACAT GTTGGATTCA AGTAACAGTT 
    GCCCTCTTCC TCGCTGGAAT CGCACTCCTT ACCGAAGGTA CGGGGTTGTC 
    GAAGACTCAA GCCGCAACAT CGTCCAAGAG CTGATGCCAT CTTATTCGAC 
    CATAACCGCT GCTTTTGTGA CTTGTTCGCG GGAAGTAACG AACAATGGGA 
    TGTACAGTCC TGTCGCTTGC CTAAGCAACA GCAGCTCATT CGTTTACGTG 
    CTAACTGGCT GGTTCGCTAA TTATATCAAG AGTCTCGAGC CTTCTTGTGG 
    GTACCTGGCC ATGACTCCTG TGGCGAGTGC CTGGCTACAT CCGAATGCAA 
    GCTATGCGGA TGTCGTCAAA CTAATGAGAG GTGGATTCGC CATTCAGTTT 
    CCTGACACAA TTAATCTGTA CTCCAGTTTC AAAGAGTGCA TGGCAGAGTT 
    ACTTCAAGAC ATCCGTGACG GTGACCAACC CAAGTCTAGT GAACGCAACC 
    AGTATAGGAT TGAGCTAGTT TCGTTAATTG AATATGGTAT CTTGCAATGT 
    GCAACTCAAG GCTCTAGACC AACTAGAGCT GTGATGGCTA TCCAATTGTT 
    CATTCGCAGA ACACCAATTG CCGTTTGGAC TTTGAAGTGT ATTGCTGTAT 
    CCTGCAGGTT CATTTTGCCG CCCTTAGTAG TATTGACCTT TCTGGTGCAC 
    AAGTATTGGA AGAGGAGGAT GATAATCGAT GCAGTCGAGA AGTTTCTCCG 
    GATGCAACTG ATGATTGGTC CGACGAGGTA TGCCTACACT GAACAGGGCA 
    TTTCAGGGAG AAGATCGGCC AAGGAGGCTA TGGCTCTGTA TATAAAGGTG 
    TTCTACTCCC AGGTGATGTC CATGTGGCTG TCAAGGTGCT GGGAAACTAC 
    AATTGTAATG GAGAAGAGTT CATCAGTGAA GTCTCCACCA TTGGCAGGAT 
    TCACCATGTC AATGTGGTTC GTTTAGTAGG GTTTTGTGCA GAGGAAGTGA 
    GGAGGGCACT GGTGTACGAG CACATGCCTA ATGGATCCCT CGACAAGTTC 
    ATCTTTTCAC ATGACATGAG ATTCTCCTGG GACAAGCTCA ACGAGATTGC 
    ATTGGGCATT GCCAGAGGAA TAAACTATTT GCATCAGGGG TGTGAGATGC 
    AGATTCTACA TTTTGATATC AAGCCGCACA ACATCCTTCT TGACAGCAAT 
    TTCGTCCCAA AAGTTGCCGA TTTTGGCCTC GTCAAACTGT ACCCATGCCA 
    CGGGATAATA GTTTTGTGCC TGTTAGCGCT GCAAGGGGAA CAATAGGTTA 
    TATTGCTCCT GAGATGATAT CTCGGAGCTT TGGTGCCATA TCTAGCAAAT 
    CTGACATGTA TAGCTTTGGA ATGCTTCTGT TGGAGATGGT TGGAGGGCGA 
    AGGAACTCTA AGCAGGATAT GTCGAGCTCA AGCCAAGCGT ATTATCCATC 
    ATGGGTGTAT AATTAGCTGG TTCAACAAGA GTTGGGTGAG GTGGTCACTG 
    CCTTTAATAT GCATGAGTTG GAAAAGAAGT TGTGCATTGT TGGGCTACAT 
    TGCATTCAGA TGAAGTCTCA TGATCGGCCA ACAATGAGTG AGGTCATTGA 
    GATGCTTGAA GGTGGTGTTG ATAGTCTGCA ATTGCCTTCT AGGCCATTCT 
    TCTGTGATGA CGAGCCTGTG CCACATGTGG TGGGTTCTTA CCATTTATCC 
    TCTTGGCTAA CTGAAATCTC GGAGGAGGAT GAGTGATAAA GCTTGTGTCT 
    GCTTGGAAGC AAACTCAGCT AACTATTTGC TTGTAAAACG CAGAAGCTAG 
    AAATGATTGT AAACAGTGAA ATGGTTATTG TACACTATTT ATCC

    Gene models with high sequence identity

    1. AT5G38280.1 [+] show detail - PR5-like receptor kinase
      E-value: 7e-72; Score: 123.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine/threonine-protein kinase-like domain 1.1e-07
    HMMPfam Serine/threonine-protein kinase-like domain 2.7e-33
    superfamily Protein kinase-like domain 1.7e-09
    superfamily Protein kinase-like domain 4.1e-45
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    Gene3D no description 9.3e-06
    Gene3D no description 2.6e-18
    Gene3D no description 4.6e-22
    ProfileScan Protein kinase, catalytic domain 9.842
    ProfileScan Protein kinase, catalytic domain 27.397
    HMMPanther RECEPTOR-LIKE PROTEIN KINASE 6.6e-33
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 6.6e-33
    HMMPanther RECEPTOR-LIKE PROTEIN KINASE 3.4e-30
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 3.4e-30
    HMMPanther RECEPTOR-LIKE PROTEIN KINASE 6.2e-111
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 6.2e-111
    HMMPanther RECEPTOR-LIKE PROTEIN KINASE 6.2e-38
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 6.2e-38
    HMMSmart Serine/threonine-protein kinase domain 2.3e-08
    HMMSmart Tyrosine-protein kinase, catalytic domain 4.2e-09

    See the detailed result >

    AT5G38280.1

    Model type
    Protein coding
    Short Description
    PR5-like receptor kinase
    Curator Summary
    putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase
    Computational Description
    PR5-like receptor kinase (PR5K); FUNCTIONS IN: transmembrane receptor protein serine/threonine kinase activity, kinase activity; INVOLVED IN: response to fungus; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: receptor serine/threonine kinase, putative (TAIR:AT1G70250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR