K07707

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07707

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07707

Determination of introduced cDNA(s)

J033126A02 - Rice Full-length cDNAs - Original: J033126A02

full reading [+] show sequence

GAGTGCAAGC TAGAAGCCTT GTTCCATACT TGCTCACTAG TTAGCTAGGA 
CATGGAAAAG TCTGAGCTCT TGCTAGGATC GTATTCATAT GCAGCTCTAT 
GTGGTGTCAC ACTCATCATA GGATGGTTAG CTCACTGGGT ATACAAATGG 
ATGAATCCTC CATGCATTGG GAGGCTTCCT CCTGGCTCCA TGGGCTTCCC 
TATTATTGGT GAGACCTTCC AGTTCTTCAG AGCAAGCCCA TCAATAGACA 
TGCCAAGCTA CTACAAGCAA AGACTGGAGA GGTATGGGCC TCTATTCAAG 
ACTAGCTTAG TTGGACGGCC AGTGATCATT TCCCTTGACC CAGAGGTGAA 
CCGATTCATA TTTCAACAAG AGGGTAAATT GTTCCAAAGT TGGTATCCAG 
AAACTGCAAT TAATATCTTT GGCAAGAAGA GCCTCACCAC ATACAACGGA 
ACCATTCACA AGTTTATCCG GGGTGTCGCG GCCAAGCTCT TTGGCCTTGA 
AAACCTGAAA GAATCACTCC TTCCTGAGCT AGAAAACTCT ATGAGGGAGA 
GCTTCGCATC ATGGACTGGG AAACCCAGCG TCGAGGTACA GGACGGCGTG 
TCAGACATGA TCTTTGACCT AGTTGCCAAG AAGTTGATCG GACTCGATGT 
CACCAACTCA AGAGAATTGA GAAAGAACTT TCAGGACTTC TTTCAGGGGA 
TGGTTTCCTT CCCAATATAT TTTCCAGGGA CATCATTCTA CCGATCCATG 
CAGGGTAGGA GAAATGTGCG GAACACACTT ACTGATATAA TGAAAGAGAG 
GCTAAGTGCA CCTGGAAAGA AGTATGGTGA CCTTGTAGAC CTCATTGTTG 
AAGAGCTACA GAGCGAAAAG CCAATGATCG ATGAAAACTT TGCTATAGAC 
GCACTTGCTG CGCTCTTGTT TACGAGCTTT GCAACACTGT CATCAACCTT 
GACTGTAGCT TTTAAGTACC TAACCGACAA TCCAAAAGTT GTTGAAGAGC 
TCAAGGAGGA GCACGGGACA ATTCTAAAGA AGCGAGAAGG TGTGAATTCC 
GGGTTCACAT GGGAGGAGTA CAGGTCCTTG AAATTCAGTA CTCAGGTTAT 
GAATGAAATT ACTCGAATTA GTAACGTCAC ACCTGGAGTT TTCAGGAAAA 
CATTAACAGA TGTGCAAGTG AAAGGATATA CAATTCCATC CGGGTGGTTA 
GTCATGATAA GCCCCATGGC AGTTCACCTA AACCCAAAAT TGTTCGAGGA 
TCCACTTAAA TTTGATCCAT GGAGGTGGAG GGAGGAGAAG AGAAGCTCGA 
TGCTGAAAAA TTACATGCCA TTTGGAGGAG GCGTCAGGCT GTGTCTCGGG 
GCAGAGTTTA GCAAGCTTTT CATTGCACTC TTCCTCCACA TCTTGGTGAC 
CGAGTATAGT TGGACGGAGA TTGAAGGAGG GGAAGTACTG CGCATATCAG 
AGATCATGTT CCCTCAAGGC TATCACATCC AACTAGTTCC TCAGACTTAA 
TATACCTATT GGATATTCCA CTGTTGTAAT AATAAAGAAA TTGTGAACCC 
AATAACTTGT TGCGTATGAT ATCTATATTG TAACTATGAA ATAAACAGCT 
CGTGTGTCTT CAGTTTC

Gene models with high sequence identity

AT1G12740.1 [+] show detail - cytochrome P450, family 87, subfamily A, polypeptide 2
E-value: 3e-131; Score: 466.00

InterPro Scan Digest

Program	Description	E-value
PatternScan	Cytochrome P450, conserved site	0
FPrintScan	Cytochrome P450, E-class, group IV	5e-17
FPrintScan	Cytochrome P450, E-class, group IV	5e-17
FPrintScan	Cytochrome P450, E-class, group IV	5e-17
FPrintScan	Cytochrome P450, E-class, group IV	5e-17
FPrintScan	Cytochrome P450, E-class, group IV	5e-17
HMMPfam	Cytochrome P450	1.4e-58
Gene3D	Cytochrome P450	4.3e-85
superfamily	Cytochrome P450	2.7e-91
HMMPanther	CYTOCHROME P450 PLANT	2.8e-227
HMMPanther	Cytochrome P450	2.8e-227

See the detailed result >

AT1G12740.1

Model type: Protein coding
Short Description: cytochrome P450, family 87, subfamily A, polypeptide 2
Curator Summary: encodes a protein with cytochrome P450 domain
Computational Description: "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1); Has 31076 Blast hits to 30988 proteins in 1655 species: Archae - 56; Bacteria - 5533; Metazoa - 10873; Fungi - 5392; Plants - 7791; Viruses - 3; Other Eukaryotes - 1428 (source: NCBI BLink).
Link: InterPro Scan - TAIR