K07821

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K07821

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K07821

Determination of introduced cDNA(s)

  • J013151O17 - Rice Full-length cDNAs - Original: J013151O17

    full reading [+] show sequence

    Nucleotide sequence: J013151O17 - full reading 
    GAGTCTTTTT TTTTCTCTCA TTCTGATCAT GCAAAAATTT CCATTGAATT 
    CTCTGTCTCC CTGCTTTCAG TGAAAACTGA ATACTGAAGA AGAGAGATAA 
    TGCATCCATC CATGTGTGTG TGTGCTGTGT TGTGTTAAGC TTTCCTTTAC 
    AAAGAGGAGG ACCACGGTGC TTTGTCAGTG TCACTGCCTC ACTGTTTGTG 
    GTCTCACCTT TTCCCTATCA CGTCCTCAAC TTACACTAGT CTACATGCCA 
    CCTTTATCAC TGTGCTTGAA ATCCATGGCT ATTTTAGTGG CCTAATGCAA 
    GAGTACTCTT CTTGACCCTG GTGGTGAGTG GTGACTGGTG AGCTGAGCTG 
    AGCTTGCAGT TTTGGTTCTT GGGGTCTTGA GGAGTTGAGC TGTGGTGCTT 
    AACACAGGCA TAGCTGCTTG CTTCTTTCTT TCACAAGTTG TTGGCATTGG 
    CTCCATGTGA TCGATGAGCT GAGAGAGCTC AGCTCAGCTC AGCTCACTTT 
    CGCCACTGCA GCATCGGCGA GCTAGAGCTG TAGATCTTGG GAAGATCCAG 
    CAATGGAGAA GCCGGCGTCG TGCTGCTGCT ACTTCCCGCT GCGGTGGGAG 
    AGCACCGGCG ACCAGTGGTG GTACGCGTCG CCGATCGACT GGGCGGCGGC 
    GGACGGCCAC TACGACATCG TCCGGCAGCT GCTGCACCTC GACCCGAACC 
    TCCTCATCAA GCTCACCTCG CTCCGCCGGA TCCGCAGGCT CGAGGCGCTC 
    TGGGACGACG ACGCGCGCTT CGCCGGCGCG GCGGGGCACC GCGCGGGCGT 
    CGCCCGGAGC CTCCTGCTGG AGTGCGAGTG CAGCAAGAAC GGGGGCGCCG 
    CCGCCGCCGC CGAGAACACG CTGCTCCGGG CGGGGTACGG CGGGTGGCTG 
    CTCTACTCGG CGGCGTCGGC GGGGGACATG GCGTTCGTGC AGGAGCTCAT 
    GGAGAGGGAC CCCTTGCTGG TGTTCGGCGA GGGCGAGTAC GGCGTCACGG 
    ACATGTTCTA CGCCGCCGCG AGGGGCGGGA ACGCCGAGGT GTTCAGGCTG 
    CTGCTGGACC ACGCCATGTC GCCGAGGTGC TCGACGAATT GCCCCAACGG 
    CGGGGAAGGC GCGCGCGGCG GTGGCGGTGG CCGCTCCTCG GTGTTCCGGC 
    TGGAGATGAT GAGCAGGGCG GTCCACGCCG CCGCGAGGGG CGGCAGCGTG 
    GAGATGCTGA GGGAGCTCAT CGAGCGCCGC TCCGACGTGT CGGAGTATCT 
    CGACTTCCGT GGATCCACCG TGCTGCATGC TGCTGCAGGG AGAGGGCAGC 
    TAGAGGTTGT CAAGTACCTT ATGGCCACTT TCGACATTGT CGATTCGACT 
    GATAATCAAG GGAACACGGC ATTACATGTA GCGGCCTACC GAGGGCATCT 
    GCCTGTTGTA GAGGCATTGG TTGCTGCATC TCCATCAACC ATTTCAGCTG 
    TCAACAGAGC TGGTGATACT TTCCTTCATT CAGCAATTGC AGGTTTCAGA 
    ACCCCAGGCT TCCGACGGCT TGACCGCCAA ATGGAGCTTA TGAGACACCT 
    GATACGTGGA AGAACATCAA ATATCCAAAA GATTATCAAC CTGAAGAATG 
    ATGCAGGCCT CACAGTCCTT CACATGGCTG TGGTTGGTTG TGTTCATCCA 
    GACCTCGTCG AACTCCTGAT GACAACCCCA TCGATCGACC TCAATGCTGA 
    AGATGCCAAT GGCATGACTC CACTGGCATT GCTGAAACAG CAGCTGCGCT 
    CTTCAACATC TGACAAGCTC ATCAGGCAGA TAGTTTCCGC AGGAGGGGTG 
    CTGAATTCGA CTGTTCTGCG AACTCGGTCA GCGATCGTTT CGCAGATAAA 
    GATGCAGGGA GGGATTGCAA GCAGCCCCGG TACAACTTTC AAGATATCAG 
    ATGCAGAGAT CTTCCTCTAC TCCGGGATCG GAACCGCGGA GTCCCGACGC 
    CCTAGCTCAT GCTCTAGCAA TGGCAAGTGT GACCATGCCC ATCATGGAGA 
    TGCAAAATGC GGAAATGCTG AAAACCATGG ATCTTCAGAG AAGAGGCTGA 
    GCTCTGCCAG CCGTGCCAAG GACCGTCTCA AGCTGATGCT GAAATGGCCT 
    CGTCAGAAGA TGTCCAGAGG ACACAAGAAA TCCGACGATG GCGACGCCAT 
    GGATTCCATC AAGAAGCTGA GCGAGCAGGC CGTCGAGACC CCGGCCCCGC 
    TCAGGCAGAC ATTCACCAAG ACGACGGCGC TGAACAACAA GAGGACCCTC 
    GCGGTGAAGA CCTCGACTCC CAGCTCGGCC ACCAAGAAGA AGCTCAACAG 
    CAAGCTCATC CACGGCATCA TGGAGGCCAT GCCGCACCTG GCGTCCTCGT 
    CTCCGGCGTC CGCCTTCCCG AGGTCCTCCA CCCCGCCGCC GCCGCAGTCC 
    GGCAAGATGA AGGGCGTCTG CCTGGAACTG GACGACGAGA ACTCGATGAC 
    GACGCCGGTG TTCGGCAAGC TGAAGGACAT CGTGCTGAAC AACGACGACG 
    ATGATGACGC CATGGGCGAG CCGTCGAGCT CGGGGTCGTC CGTGAACGAC 
    GACGCGTCGG CGGAGATGCC GGCGCGGCGG CACGGGTGCG GCAACGGGAG 
    GCTGATCAAC ATCTGCTTCG GCGCGCAGGG CCTCACCGTG GAGGACTCGG 
    CCAGCGGGCA GCAGACCAGC AAGATGTTCA AGCAGCAGTG CCTCAGGGTG 
    TCCTGACTCC CGAGTGACTC ACACGCGCAC ACGGTATAAT TAGCCTGCTT 
    TTCTTTGGTT TTCTGACTCG AATTGAGCTT GCAGTTCAAC GGAACATATA 
    TGGTTTCTGC ATGTTGAACT CGTCGGGCTT GTGTGGATTT TGTTGGCTGC 
    TGCGTGTAAC CGTATCCTTG CGTGGCGTGC TTGGTTTCTG GTTGGGCTTG 
    TGTTAACGCC TTAACGGCTT ACTTCGATGC AAATATATTT GGTGAATGTA 
    TC

    Gene models with high sequence identity

    1. AT3G01750.1 [+] show detail - Ankyrin repeat family protein
      E-value: 4e-133; Score: 473.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Ankyrin repeat 10.018
    ProfileScan Ankyrin repeat 10.018
    ProfileScan Ankyrin repeat-containing domain 25.939
    Gene3D Ankyrin repeat-containing domain 2.9e-33
    superfamily Ankyrin repeat-containing domain 1.1e-39
    HMMPanther ANK REPEAT-CONTAINING 3.4e-39
    HMMPanther ANKYRIN REPEAT-CONTAINING 3.4e-39
    HMMPfam Ankyrin repeat 1.4e-05
    HMMSmart Ankyrin repeat 4.4
    HMMSmart Ankyrin repeat 1600
    HMMSmart Ankyrin repeat 2.3
    HMMSmart Ankyrin repeat 19
    HMMSmart Ankyrin repeat 0.22
    HMMSmart Ankyrin repeat 0.00065
    HMMSmart Ankyrin repeat 650
    HMMSmart Ankyrin repeat 4.7
    HMMSmart Ankyrin repeat 2100

    See the detailed result >

    AT3G01750.1

    Model type
    Protein coding
    Short Description
    Ankyrin repeat family protein
    Computational Description
    Ankyrin repeat family protein; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT3G04140.1); Has 30372 Blast hits to 15038 proteins in 745 species: Archae - 53; Bacteria - 2422; Metazoa - 15116; Fungi - 2165; Plants - 2906; Viruses - 97; Other Eukaryotes - 7613 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR