K08011

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08011

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08011

Determination of introduced cDNA(s)

  • J033126M21 - Rice Full-length cDNAs - Original: J033126M21

    full reading [+] show sequence

    Nucleotide sequence: J033126M21 - full reading 
    GGCAAGCACA ACAGTAAGCA CTAAGCCACT AACGAGCCAA TCTTCAGATT 
    AAGGCTAAGC TAGCTAGCTA GCCTGCAACC TCTCTCCAAC AACCCAATAG 
    TGACGAGAGG TATATATTCC TGCAGAGAAG CAGTGCAAAA TTTCCCAAGG 
    CTTTCTCTCA TCAGAGAACT GGTTTTGATG AAGAGCCGGG GAGAAGAAGG 
    CGAGGCTGGA TCGTCGTTGT ACCGTTTTCG ACATCGCCGG CTGATGGATA 
    CAACACCCGC GACTGATTCA GGAGGGCACT CGAGCCACAA TGGGATGCCG 
    ATAATGGTGT CGATTCTGGT GGTGGTCATC ATCTGCACCC TCTTCTACTG 
    CGTGTACTGC TGGAGATGGA GGAAGCGCAA CGCCGTCAGG AGGGCGCAGA 
    TAGAGAGCCT GAGGCCACTG TCCAACTCGG ACCTGCCTCT CATGGACCTC 
    TCCTCCATGT ACGACGCCAC CAACCAATTC TCCAAGGAGA ACAAGCTCGG 
    CGAAGGCGGC TTCGGCCCTG TCTACAGGGG TGTTCTGGGC GGTGGCGCGG 
    AGATCGCGGT GAAGCGGCTG TCGGCGAGGT CGCGGCAGGG CGCGGCGGAG 
    TTCAGGAACG AGGTGGAGCT GATCGCCAAG CTGCAGCACA GGAACCTGGT 
    CAGGCTGCTT GGCTGCTGCG TGGAGAAGGA GGAGAAGATG CTCATCTACG 
    AGTACCTCCC TAACAGAAGC CTCGATGCCT TCCTCTTCGA TTCCAGAAAG 
    AGGGCTCAAT TGGACTGGAA GACTCGGCAG AGCATCATCC TTGGGATCGC 
    CCGTGGTTTG CTCTACCTCC ACGAGGATTC ATGTCTCAAG GTCATCCACA 
    GAGACCTCAA GGCGAGCAAT GTGCTCCTCG ACAACAAGAT GAACCCTAAG 
    ATCTCCGACT TCGGCATGGC CAAGATCTTC GAGGAGGAGA GCAACGAGGT 
    CAACACCGGA CACGTCGTAG GCACATATGG GTACATGGCG CCGGAGTACG 
    CGATGGAGGG CGTCTTCTCG GTGAAGTCTG ACGTGTTCAG CCTCGGCGTT 
    CTTGTGCTCG AGATCCTCAG CGGCCAACGC AATGGCGCAA TGTACCTTCA 
    GAATAACCAG CAAACCCTGA TCCAAGATGC ATGGAAGCTG TGGAACGAGG 
    ACAAGGCGGC GGAGTTCATG GACGCGTCGC TCGCCGGCGA CTACTCGAAG 
    GAGGAGGCGT GGCGGTGCTT CCACGTCGGG CTGCTGTGCG TGCAGGAGAG 
    CCCCGAGCTC CGGCCGACCA TGTCCAACGT GGTGCTCATG CTCATCAGCG 
    ACCAGATGCA GCTGCCGGAG CCCGCGCAGC CGCCGCTGTT CGCGGCGCGG 
    GAGATGAAGA AGGTCTCGGC GTCGGAGTTC TCGCTGGCGA TGAAGACGGA 
    GACCACCAAG ACGCAGTCCG TCAACGACGT GTCCATCTCC ATGATCGAGC 
    CACGATAAAA AAGAAGAAAG AAAAAAAAAC GTCGTTTTTT TTCTTCTTTT 
    TTTATTTCTC TCTCTCTCTC TCTCAAACTG TGTTTATTAC GAGAGTTTTG 
    ATAAGCTAGT GGTGATGGAG ATTGAGAGAA ATAAGAAACA AATAACAGCG 
    TGGAG

    Gene models with high sequence identity

    1. AT1G11330.1 [+] show detail - S-locus lectin protein kinase family protein
      E-value: 6e-107; Score: 385.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Protein kinase-like domain 1.4e-82
    HMMPanther SERINE/THREONINE RECEPTOR-LIKE PROTEIN KINASE 8.7e-204
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 8.7e-204
    Gene3D no description 6.8e-24
    Gene3D no description 1.1e-50
    HMMPfam Serine-threonine/tyrosine-protein kinase 9.3e-50
    HMMSmart Serine/threonine-protein kinase domain 9.4e-33
    HMMSmart Tyrosine-protein kinase, catalytic domain 3.3e-40
    ProfileScan Protein kinase, catalytic domain 37.389
    PatternScan Serine/threonine-protein kinase, active site 0
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT1G11330.1

    Model type
    Protein coding
    Short Description
    S-locus lectin protein kinase family protein
    Computational Description
    S-locus lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: S-domain-1 13 (TAIR:AT1G11350.1); Has 124566 Blast hits to 122714 proteins in 4439 species: Archae - 108; Bacteria - 13570; Metazoa - 45533; Fungi - 10903; Plants - 35507; Viruses - 467; Other Eukaryotes - 18478 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR