K08250

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08250

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08250

Determination of introduced cDNA(s)

  • J033107C20 - Rice Full-length cDNAs - Original: J033107C20

    full reading [+] show sequence

    Nucleotide sequence: J033107C20 - full reading 
    GGGGCTGCTT CCTCGCCTGC TTCGGCGACC GCCGCCGCCG GCGGCAGCCG 
    CGGAGGCAGT CTCCGGCGAG GTCCCCGCCG CCGCGGCCGG ACCATGTTGC 
    TCTGCTCGGC AAGGCGTTGA CGGCGGTGGA TGTGGAGGCG AAGGAGGAGG 
    TGGAACCGCC GCCACTGTTG CAGGAGGCGA AGGATGTGTT GCTGGCACCG 
    CCGCCCATGC CGGTGGAGGC TGCGGAGGAG GTGGTCACTG GCGCAAGGCC 
    CGGAAAGGAG CTGAGTGAGC AGAAGGCATC GCCAGCAAGC TCTTTGCTGC 
    CGGAGAAGCA AGTAACACCG CCACTCTCCC CGGTGGCACA CTCACCACCT 
    TTGGCGGAAG CAGTTGTTTG CACTCCTGAT CCAGAACTCA GGGAGGTGGG 
    CGGACAAGAG AGCCGCAGCA GTGGCAAGAA GAAAGTAACG TTCGACATGA 
    ATGTTACGGC ATATGAAAAC ACTGCACCGG CTGACCAAGA GGAGGAACCA 
    CCAGAGCCTG TCAGTATGGT AGAAAATGAA GATGGAAAAC ACATGCAAAA 
    GGATGTGCTG CTCCCGGAGA ATCACCGTTA CCGGAATTGC TCAGACAGCG 
    AAGAAGAAGA AGATGAGTAT GGTGAGGACG ACAACTACGG TGATGATAGT 
    GATGAGGAGG AGGAGGATTT TGTAGACTGC AAGATTGATT TAGTAGACAA 
    GGATGAACTG TACACTGAAG ATATCAAGCA GGAGTCCCAT GAGTCTCTTT 
    TCTCATTGCA AATGTACAAA GATCAGCAGA ATGACAATGA AGTCAGCAGC 
    CCTGCACCTA AGAGCAGTAG TACCTCTGTA GAGGAACAAA GCCCTCTAAT 
    TCAGAGAAAC AATCATCGCG ACAGAGGCCA GTATGTCCGT CCTGTGCTGA 
    ATCCGGTTCA GAATATGTCA CAGTGGAAGG GAGTAAAAGC CCAAGCAGCA 
    CCAGCTAAAA AGTCGAATAA GGAGAATGTA AATTCAGTGC CAAAGGTAGG 
    TGCAACCCCT GAAAATTCTA TCAAGAAGGA AGTTTCTGTG GATGCGAGCC 
    TCTCTACTTG GTTGGTTTCT TCAGATAACT CAACAGTAGA CAAGGTGCAA 
    AGTGGATCTC CTTGTTCCAT TTCAACTGTA AACCGAGATG AAAGGCCTGT 
    CCTGGGTGCT TTGACGGTCG ATGACCTTAA GCAATCATCA GCTACATCAT 
    CTCCACGAAG GTCTCCCAGC CATAACCGTG AAGAGGCGAT CTTGGGTACG 
    GTGGGAAGTT ACTGGAGTAG CACCAAGCAA GACAATGCAC ACTGTTCTTC 
    AAGATCAGAT TCAGGAACCA ATGGAATCCC CAATACGACA AGCAAATACA 
    GAGAGGTGCA TTCAACACTC AAGTCATATG TTTCTTCAGA TTTTTGAATG 
    ATGTACTGAT GCTTCAGTGG GTTGCTGCAG GACAAAAGGG TAAACTGGCA 
    CTCAACTCCC TTCAATGTCA GGCTGGATAG AGCACTGAAG AAATCCTCTG 
    CATGAGCTTG TTTCTCTTCA TTTAAGCGTT TGAAAATTTT CAAGTGTGCC 
    AAGTCCTTGT TTGTTGTCCA CCTTGTAAGA ATGTGTAAGA TTTAGAGTGT 
    GAAGCCAATT TCATTTCATG TACATGAAGG TGCAGAAGTT CTTCTGGATT 
    TTGGACC

    Gene models with high sequence identity

    1. AT1G04030.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); ...
      E-value: 1e-29; Score: 128.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G04030.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR