K08411

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08411

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08411

Determination of introduced cDNA(s)

  • J023075J12 - Rice Full-length cDNAs - Original: J023075J12

    full reading [+] show sequence

    Nucleotide sequence: J023075J12 - full reading 
    GTGGGGAGAC AGAGATAGAT AGAGAGGAGA GATGGGCAGC GAGGTGAAGC 
    CGGCGAAGCT TGGCCTCCGG CGACACCTCA ACGCCGGCTT CTTCGCCGGC 
    TTCCTCCTCG TCCTCCTCAC CTACGTCATC GTCTCGCAGC AGTTCGCCAT 
    GGAAACTCCC ACAGCTGTCA CTAGCAGGGC GCCGAGGATT GACGAGAATG 
    AGTCGGTGAC CAAGGCTCGC GTTGAAACAG AGAAGAAGAG GGAGCAGGAG 
    TGGCAGCGGC CAAAGGACAC GTCTGGTGCC GTCTCAGCAG AAGAGTTCTC 
    CAAAAGAGAC TCGACAAATG CCAAACCGAT TGAGAACGGC AAGGTAGTGT 
    GCGGCTCGAA CGGGTTCTAC TCCGACACCT GCGACGTCGA CGGCGACGTC 
    CGGATCAACG GCACGGCTCT CTCCGTGACC CTTGTTCCGG CGAGCCGCCG 
    GTCGGAGCGC CGCCGCGAGT GGAAGATCCA GCCGTACCCG CGCAGGACCG 
    TGTCCGGCAT CGCGGAGGTG ACCGTGACGC GGCAGCAGGA CCGGGCCGCC 
    GCGCCGGCGT GCACGGTGAC CCACGGCGTG CCCGGCGTCG TGTTCGCGCT 
    CGGCGGCCTG ACCGGCAACT ACTGGCACGA CTTCAGCGAC GTGCTGGTGC 
    CGCTGTTCGT GGCGTCGCGG CGGTACGGCG GCGAGGTCCA GTTCCTGGTC 
    AGCAACATCC AGCCATGGTG GCTGGGCAAG TACGAGGCCG TCGTGCGGCG 
    GCTGTCGCGG TACGACGCCG TCGACCTCGA CCGCGACACG GAGGTCCGGT 
    GCTTCCGCCG CGTCGCCGTC GGGCTCCGCA TGCACAAGGA GTTCAGCGTG 
    AAGCCGGAGC TGGCGCCGGG CGGGCAGCGG CTGACGATGG CGGACTTCGC 
    CGCGTTCCTC CGCGACACCT ACGCGCTCCC CCGCCCGCGG CGGCGGGCGC 
    GAGGCGGCCG CGGCTGGTGG TGATCTGGCG CGCGCACTAC CGGAAGATCG 
    TGAACATGGA CGAGGTGGTG CGCGCGGCGG AGGCGGCGGG GTTCGAGGCG 
    GCGGTGATGT CGCCGCGGTT CGACGAGCCG GTGGAGGAGG TGGCGAGGAA 
    GGTGAACGCG TTCGACGCGA TGGTGGGCGT GCACGGCGCC GGGCTGACGA 
    ACGCGGTGTT CCTGCCGGCG GGGGCGGTGG TGATCCAGGT GGTGCCGTAC 
    GGGCGGCTGG AGCGGATGGC GAGGGCGGAC TTCGGCGAGC CGGTGGCGGA 
    CATGGGGCTC CGGTACATGG AGTACAGCGT CGCCGCCGAC GAGAGCACGC 
    TGCTGGAGAT GCTGGGGCCG GAGCACCAGG TGGTGAAGGA CCCGGAGGCG 
    GTTCACCGGA GCGGCTGGGA CAAGGTCGCC GAGTACTACC TCGGCAAGCA 
    GGACGTCCGC ATCAACGTCG CCCGCTTCGC CGCCACGCTC GCCGCCGCCT 
    TCGATCACCT TCGACCATCA CATAGCTAGT GAGTGAGTGA GTGAGTGACA 
    CAGATGTTAC AGTTGCTGAT AGATATGATA CACCACCTCA TTGGTCGCAA 
    TTTGGTACAG AATGTTCAAC CCATCCTTTT TTGTTTTTGT TTTGGCTCAG 
    TATATCCATC ATCATTGGTG GAGCGTATGA ACATGCACAT TGATTGTATT 
    GATTTGGTAG AGTACATGTA TGTCACCGAA TTCATGTT

    Gene models with high sequence identity

    1. AT3G18180.1 [+] show detail - Glycosyltransferase family 61 protein
      E-value: 7e-36; Score: 149.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Glycosyltransferase AER61, uncharacterised 5.4e-10
    HMMPfam Glycosyltransferase AER61, uncharacterised 2.7e-74
    HMMPanther GLYCOSYLTRANSFERASE 7.6e-19
    HMMPanther GLYCOSYLTRANSFERASE 1.2e-37

    See the detailed result >

    AT3G18180.1

    Model type
    Protein coding
    Short Description
    Glycosyltransferase family 61 protein
    Computational Description
    Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G18170.1); Has 763 Blast hits to 763 proteins in 164 species: Archae - 0; Bacteria - 23; Metazoa - 306; Fungi - 8; Plants - 399; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR