K08422

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08422

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08422

Determination of introduced cDNA(s)

  • J013156A15 - Rice Full-length cDNAs - Original: J013156A15

    full reading [+] show sequence

    Nucleotide sequence: J013156A15 - full reading 
    GGTCTTTCCC TCACCCTCTC CCTCCCCTCT CGTGCCATCG CCGCCTCCGC 
    CTCCGCCTCC CATCGCCTCC CCCTCCGCCT CCCCTCGCGT CGCCTCCCCC 
    TCCGCCTCCC CTGCGCCGTC ACCATCGCCA TCCCCGTCCC CTCGCGCCGC 
    CGCCTCCACC TCCTCCTCCG CCGCCGATGG CCAAGCCCTC AAGGTCGCCG 
    GATCTGATGG CAGCGAGTTC GTGGTCGGCG AATCCGGTGA TCTAACGGCT 
    GATGAAGGGG ATGGTGGTGA TGGAGCGCGA GGTCCGGGTC ACGCTCCGAG 
    GAGATCGCCT CGGCCAGGTA CCCCGCTGTG AAGCCCGGCC GGAGCCGCGC 
    GACCCACGCC GCGAACTGCT CGTCCGGCGG CGCGCGGACG GGGGACTCGG 
    CCTCCACCAC GTCCGCGGGC ACTCCTGCTT CTTCTCCTCC AGATACGCCA 
    TAGGAGCTGA AGCGACGGAG GCTGCGAGAG AAGCGGCGGG CGGTGGCGGC 
    GAGGAGTGCC ATGGCGGTCG GGCTCGCCTG CTCCGGCCGA GGCGCTTCTG 
    GAGTATATAA ATCACCTCCT GCCATTTTGC AGTAGCAGCA ATCTGAATGA 
    ATATTGCAAA TCCAAGACTT GATGACCACT TTTGCTGATC AGACAAGAAG 
    AACGGCCAAG AAACATTGTT TGGACTACGC CCCATGGCAG ATTGGCAGAT 
    GGAGAATTTA CGCATATGCA AATCCTGCAA TTTCTGCATA AATTATAATG 
    ATGCCTGAGC TGTGTGGCTG CAGATGCTCC CAGCTGCAAT CTCTTTAGTT 
    AATTACCTAA ATGACCTGTG CTTTCAGATG TACCAGACAC CTCCTCCAAC 
    ACTGAAGTAG AGCTATCAGC TCATCGCCCT TCTAATACCA CCAGATCAGA 
    TAGCGTCGGC TAGGGAGGCT GAAGCCCACC GAGATGGCAC AGGTGCTGGG 
    AGGTCGCTTG TGCATATTCC GATTTGAGAT TGCACTCATT AATGAGAGGT 
    TTTGTTCTCT TCTTGTTGTT GTGGGTTGCT TATGCACTGT GCCACAGGTG 
    CTGGGAGATA CAGCATAGTC ATCTGAGCAA CTCCGGCTCT TTGCCGGTTT 
    GCGCCCGTCA AGATCTTCGA GGACGACATG CATCTTGCCA TCTCTGTTTG 
    CTTCACATCT TCCACATGTT CAGCATGGAT GGTCACTTAG CTCCATGGCC 
    TGAGCTTGTC AAGTTACACA GAAAGCTATT CCTGATGTTC CAGCGTTTCC 
    CAATTGAATA GAAAGGAACT AAGGAAGGCG TAAAAAGACG AATGCGGTAC 
    TATCTTTTAT TTATTGTCAT CCCTTCCACT CTTCCAGAAT TAATACTTCC 
    AATAATTTGC ATTTCTAACA CATCTCCTTT CACACACGTT GGATATGTGA 
    CTACCATATG CTTTCCTGGC TTCTTGACCA GATGTATAAA AGAAAGTAGG 
    TCCTATGTCA ATATCTTCCT ACTTTCTTTG TGTGTTTGTG GCGGGGGGGG 
    GGGGTCTCCA GACTTTAATT ACTTTACTTA CAGCATATTA AGAGATGTGC 
    TTCAATGCGT TCAATAAACA AATCAATCTT CATATTCTGA ATCATCCAAT 
    TTTTAACTTC TACTGTTTGG TAGGTTTCTC TATTCGCATG TTCAATACTC 
    AATCTTGAAC CCTTATACAT TGCTTTCATT TATCTGATGA CATTTACATA 
    TAAATCTCTG TTAATAGCAT TGTCATTTAA TGCTAGCAGC TCTGCATTAT 
    TCATTTTCAT TTGCCACTTG TGATGTTCAC CTCGAGGAAA TCATTTATAA 
    CATGATTTTA ATTGGTGTGG AAGCAAACAA AGCATACTGC TAGATTATAG 
    TATAAACTTG TGAAAGATAT ATTTCCTTTG CCTTGTTTAT ATCCTAATAG 
    ATTAATTGTG TTTAGAGAAA TACCTGAGCT GAAAATGCTA TCGAGATTAT 
    GGCTAAAAGA ATTTGATTTT GGTAGAATAT ATAAGAGGGA ACAAAAAAAT 
    ATTCATTTCA CAAAAGTCGT GTGTGTGCAT GTATCTGCGC ATAGGCATTT 
    TTTTTAGCAA AAATACTATA TGGTGATTCT TTTACAAATT GTCAATCCAT 
    TGTTCCATCT GTGTAATGGG ACTATCTTTT TCCCTATGGA TAATCATGGC 
    AAATTCATAG TTGAAGCGAT GAAAACAGAT CTACATGTAA CTAGCCATTT 
    GAAAGTATAA CATATCAATT TTGCTGAACG AGTTAAAAAT GAACTTTTGT 
    TACTGGAGTA TCCTTGGATT TTTGTGAAGT AATCGACATA AAAGATAATT 
    CCTACCAAAT TTATTTAGCT TTTGCAACTA GCCATTAAAA AATGTGCCAA 
    GAATAAACTG CAAAACACAA TCCTATGTTG TGTCATTTTG AGCATGTGCA 
    AACCAACAAT TGTACTCACC GATATCCTTT GTTGATAACA TTCACTTTCC 
    TTAGATGGTT GGTTGAGATT GTACCTTCAG CTTCAGTATT GTTCGTCTTA 
    AGGAAACTAC CGACTAAACG GGGAATCACA CAGCACCATC CAACATTAGG 
    TCAATCTGGG AGTCCCCAAT ATGTCATTTC AAATTGTTCA GCTACTCTAT 
    GTGAGCAGAA ATGCAGGTTG TCCGATACAG ATGAACCATG AAATCCTATT 
    GATTGAATTG CACAGTTGCT TGATTTGCTT TGTATATGTA CTGGTTATGC 
    ATTTTGTTCT CATATAAGTA ATGTTGAGTG CCAACCCCAG TTTGTAGAAA 
    TACAAATATA AAATGTATCC CAGTGATATT TCCACTTTGA ATCGTTTATA 
    ATTTGGACCA CATGATTGTT CTATACAACT TTTTAGTTGT TATTTGTTGC 
    ATGCTTACAA TATCTAATAC TGGAAAGAAA AAATATTAAA ATTGCTAAGG 
    ACAAAAGAAA TTACATACAA GTTACATTCT TTTCTTGTTT CTTAAATTGT 
    AGTACCATAT CACTTATCTT AAGTAAAACC ATGTTCTGTT GCCACTTATT 
    AACATTTTTT TTCAAAAAGA ATCCATTAAC AAAACCATGG TATTTCTTCA 
    CCGTTTGTAA TTACATATAT AAAAAAGTTA ATATTTTGCA TGGAGCTGTT 
    GAATGAATAT TTCCTTGATG TTTAAGATTC TTAAAACTAT GTAGATCCGA 
    GTGGCAATTT TCACTTTGGA GGTATGCAAC TGATCCTCTC ATTCTATTAT 
    TTTTTACATT ATACAAGGGT CTATCCCTAT AAAGCTTATT CTACAGACTT 
    GTCTACATTA TGCTTGAATG GAAAATTCAT CTAGCCTGCA ACTCCTACAA 
    TATCTACCAT ACAGATCTTG GTTATAGTCA TACACTTCTG CTAGACCTAA 
    AAACTCATGG GACAATATGT AATCTGTATT GCATTGGAAT ATTGGAATTA 
    TTTCTTACCG CTAACTTAAT TCATACACTA GCTAAATGTA AGATAATTGG 
    AATTATTTCT TACCGCTTTG ATCTAATAGA GGAAGTATCA GCGTAACCAT 
    TTAAGTAAAA CAATCTTTTT ACCCCAAATG ATAGGTTGAT CCCAACTCTA 
    TTAGTTGCTT ATATTCACAA CATTTCCTCC CATTGCAATA TTTCTTTATA 
    TACAATTTGG TTTAAATTAA TATTTTCATC TATATTTGTC ATGTTTTGCT 
    TATCAGTGCC CTCACACGCC TGTTGATATA TGATATATTA TATAGTTTTT 
    GTTATGTAGA CATCACATGG TTTCAATTAG ATTACAACCA TATTTGAATT 
    ATCAAGATAT TTGCTTTGCA TGATCTACAA TGTATTTTAG CTTTGAAACA 
    GCTGCCAGTA TCATTGTTTT CTATTTGCAA TTAGAATATT GGCAGAATAA 
    TATGGCCACT TCAAATTTTC ACTTAGTTCT ATTGCTTGAC AGAATTAATG 
    TGGTTTGGTT GGGTTGGTCC AATTGAAAGG GTTGCTGTCA TTCTGCTCTG 
    TTTACTGGTG ACGCATTGGC TTGGAAATTA AGTCTTCAGC CAGCTTTTGC 
    GCAAAACAAT TTAGAATAAT TTTTGCTTGC TATAATTTTA TTTGTTTGTA 
    AAAAATTGTG TCAAAAAAAT GTCACAGAAT TGCTAGCTAT TTTGCAGTTC 
    TAACTAGGCT AGATGACTCT ATTGTAGTTT TGAACTGACA TACTGAAGTT 
    TTTCGTCTCA GTCATTCTGT GATCCCAAAC AAAATCAGCA TGATGTGTCT 
    CAGTATGCTA CCCATTGTTT CCAGCACTGG CTTTCCGTGG CAATAGAAGT 
    TTCTCAAATC TTTCAAGGAA AGACAAATCT TGAGGATAAC CTGCCATTCC 
    TTCCAGTGCG TCTTAAGTTT AAGAGTTGGA AGACAAATCA ATATCAGAGT 
    ATGGGACCAT GTTGCTTGCA GCCACCGATC AATTGTGCCT AAATTAAATC 
    TGAAGGATTA TCAAGAAGAA AATATAAATT CTAAGAGGCA TACTTATATT 
    ATCGCAGCTG CTCTATATTA CCAGAAATGT TAGCCGCTAG CTTTAGATTA 
    TCTGTGCAAG TTGGCTTTCT CTTCCATTGA TTCTATTGAT TGTATTGCAT 
    AGGTGCTTCA TCTGCTTTGA TTCTGTACCG GATATGAGTT CTCAGATCAG 
    TAATGTCGAG TTCTATATGA ATATAGCACC AGCCCAAGTT TGC

    Gene models with high sequence identity

    1. AT2G02180.1 [+] show detail - tobamovirus multiplication protein 3
      E-value: 1e-06; Score: 33.90

     

    InterPro Scan Digest

    See the detailed result >

    AT2G02180.1

    Model type
    Protein coding
    Short Description
    tobamovirus multiplication protein 3
    Curator Summary
    Necessary for the efficient multiplication of tobamoviruses.
    Computational Description
    tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR