K08602

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08602

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K08602

Determination of introduced cDNA(s)

  • J013123M19 - Rice Full-length cDNAs - Original: J013123M19

    full reading [+] show sequence

    Nucleotide sequence: J013123M19 - full reading 
    GTTAGATTCA TTCCCCTTCT CTCCCACTGC GAGCGGTGCC GCACAACCCC 
    TCCGCGAGCG ACGGCGGTGG CGCCCTTCCC CACCGCGAGT AGCGGTGGTG 
    CCCTCCCCCA CTGCGAGCGA CAGCGGCCAC GGTGCCCTCC CTCAGCATGA 
    GCAGTGGCGA TGGCGGCGAC GGCATCCTCC CGCAGCTTCC ATGGGTGGAT 
    CAGGCGGCGT CGGTGGCTTC CCGCGGGCGG ATCCGATGGG CACAGTGGTG 
    TCGGCGGCTT CCGCGGGCAG ATCAGGCGAC AATGAAGATT AAGATAAGAT 
    TTGTGCATTT ATTATTATTA TTCTTGTTTT TCTTTTTTTT TTTATTGTCC 
    AATTGGATTT TGTATCTACG TTTGAATTTG TGTTTTATCC ATCATACGTG 
    ATGTGTTACT CGCGCGTGTG GGAACGGAGG CCATCGTTCG ATTGGACTCA 
    TCAGACAAAA AAATGATGTG AAGAACGGGA AATTAATTTT TGAAGTAGTT 
    ATAAGATATG TTGGTTTAAT TCCAGTGTTG ATAGGTTAGT CACAGTTTAT 
    TAGTAGAGTC ATTAGCGGCT AGAGTACCAA AAGTAATTAG TGTTTTCTTG 
    ATTAGTCTTT TCCTTGTATG TTTCGAGTCC GAACCAAGTC ACAGTCCGGT 
    TTATTTTATA TGTGTCGTCA GTAGAGAGGC ACAGACGAAA ATTGAGTACA 
    GAATCATCTT CAAATAATAG TAGAGATTAA AACCGATTCA AATACGGATG 
    ACGTAGCAAA ATTCTGGCGA GAACAAGTTG ATACTGCTAA AGTTGGCAGA 
    TCTGTTCAAG AGAAATTTCA AGGTATTTGC AAATTACAAG AAAGGTGGTG 
    TTAGAGATCT GGCTGATGAG ATTGCTGCTG CAGGACCAAA TTTCTTATTT 
    TAATTGAATA ATAGTAGTAG CATGTCTTAA TGTATACTAA ATAAAAGGGA 
    TTTTTTATGT TACTCGAGGA TGTATCTCAA GCTACCACTC ATTTTAGTGT 
    AAATTTTTGA TACCTCATGA TACTTCTCCA GTGTAAAGTA CCAAAACGTA 
    TCGTAAATTA ACACTAAAAT ATGGCATCTC TCGGTACCTA GTCTTGTACG 
    GTAAAACTAA ATAAAATGCC CATTTTGAGG ATGGTGACAT ATATATATTA 
    TAAAAGGTTT CAGAGTAATG TATATGAGAA GTTGTGTTTA TGACTTATTA 
    GCTCACGATA ATACCTGTGA ACATTTTGTG TCTAGCCAAT ACAAAGCATT 
    ATATTCTCTT TTTTAAAACT ATATATCCCT AGATTTTTGT ACCATCAACA 
    AACTTTGGAG AAAGGAGCGT ACAAAAAGGT AGAGCTAAAA ACAGTACGAT 
    GGACAGTTAG CATTTGAAAT GTTGAACGCC TTTGTTAATC TAGACACACT 
    AAAACGATAA TAATATTTAC ACCACCAAAA ATCAATGATT AAAAAATATT 
    TTCCTAATAT ATTTATCTTG GGTTGAATTA CTACCTTTTT CTATAAACTT 
    GGTCGAATTT GAAACAGTTT GCCTTTTATC AAAGTCAAAA CGACTTATGG 
    TCTAAAACGA AAACGGAGGG AGTAATAGTT AGGGTCTTTA AAAAACAATT 
    CTTTCAGCGG CAAGACACAA ACTAATGGTT ACGAGGTAAC TCTAAAGATA 
    ATACAAAGAT AGACATGCAT CGCAGGTAAA AAGGGTTATT GAAACTAAGA 
    GTAAGACACT TATGACAACA TTGATATAAT CAATTAGTAC GAGAGATGGT 
    ATTACATGTG ACAAAAAAAT TCACCAAGGG CCATTACATG GTGGAAAGGA 
    GCACCACGTA ATAAAGGTAC TTACTATGGG TACAACACAC AATAAACCAT 
    AAAAGTGGTG GTGCAGTTAA CTTAAAATGT TGGCAGAGCA CACCGGTCAG 
    CTTGTCATTC ATTTTATGAT CTCTTTTTTT TCCCTCTTGC AAGGTATAAA 
    AGTAGAAATA TTCCCTCATG AAATTCAGTT TAGTTTTATT TCCTCATGAG 
    AATTCAGTTT AGTTTTATTT CTCTAGTGTG AGGGTTATTT CTGAAAATTT 
    GAATGTTGCG CCTAGCTTTT CCTTTCTTCG GTTGGTAATA TACCATCATT 
    TTCATGCCAT GTCACTGGCA ATCACATCAA GCAATTTTTA TCGGAACACA 
    AAAGAACTAC TCCCTCCGTT CTAAAAGATA AGTATTTTTT GGACTCTGAC 
    ACGGTCTCCG AGATATTATT TTGACCAATA ATATCTATAA AAGTAAGATG 
    TTTCAAATAA AAAAAATTTA CATATTATGA TAGTTTCTTT AATGATAAAT 
    CTAGTAACAT CAATTTTACA TTATTGATCT TTTTTATTTT TTTGCTATTA 
    ATAGTCAAAA TTAAAAATGT TTAATTTGCA ACTATGCTAA AAATGCTAAC 
    ATTTTGGGAC GGAGGGAGTA CTAATTATAG GGTACATGTA TTTCATATTA 
    TTCCATACTA TTATATTATT TTAGCAATAA TTCTTTTCTT GACTTCAGCT 
    ATATCTGTTC ATTCAATGAA AAAAGCGTGT AGCATGAGAT CCTGCAAATG 
    TTTTCAGATG ATTTCACTTT ATTATGTTAA AAACTGAATT GTAGTACTGT 
    TCGTTTCTGC AGGCTTGAAT ATCATCTGTT ACCACACTAT TCATTCCTCT 
    GCAGTTTGTA CCATATGCAA GTGTTTGTTC ATATCTTTAT GGCTACTTTG 
    CCCTGCAGCT TCCTCGATAG GTTTTCTGGA TCCTACAATA ATACTTCACT 
    ATTGAAGATG TTACTATATA TACCGGATGC ATGGTGGTTG AGTTTGGTTT 
    TTAAGGCACT AACACGGAAG TTCACGGATC CAGAAGCTTT CTACTTACTC 
    AGAAACATTA CAGGATTATA TCACCAAACT GCAGCCACAA CATTCAATAT 
    TCATGAAGGT GTGATAGCCC TAGCCTACCT TATCAAGGGA GTTCAAGTAG 
    TCAACAGCTC TCTCCCTGTT GATCAGAAAG GGATGCTTAC TTGCCCCACC 
    ACAGATCATC TGTTGTTTCA TCCTTGACAA CACGCTTGTC CCTAGGTGAT 
    CGACCGGTCT TTGCTCCTGA TAGCGTCGCT AACGCCCCAC TGGATGTGAT 
    GAATGACCCT TTCTCATATT TGATTGCATG CTCATAAAGT TCTACACAGC

    Gene models with high sequence identity

    1. AT4G37870.1 [+] show detail - phosphoenolpyruvate carboxykinase 1
      E-value: 3e-24; Score: 39.30

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Phosphoenolpyruvate carboxykinase, ATP-utilising 5.2e-12
    Gene3D Phosphoenolpyruvate carboxykinase, N-terminal 9.4e-08
    superfamily Phosphoenolpyruvate carboxykinase, N-terminal 2.9e-12

    See the detailed result >

    AT4G37870.1

    Model type
    Protein coding
    Short Description
    phosphoenolpyruvate carboxykinase 1
    Curator Summary
    Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).
    Computational Description
    phosphoenolpyruvate carboxykinase 1 (PCK1); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: defense response to fungus, incompatible interaction, response to cadmium ion, cellular response to phosphate starvation, gluconeogenesis; LOCATED IN: cytosol, nucleolus, nucleus, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 2 (TAIR:AT5G65690.1); Has 4504 Blast hits to 4501 proteins in 1411 species: Archae - 21; Bacteria - 2559; Metazoa - 2; Fungi - 139; Plants - 194; Viruses - 0; Other Eukaryotes - 1589 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR