K08607

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K08607

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K08607

Determination of introduced cDNA(s)

  • J033001M17 - Rice Full-length cDNAs - Original: J033001M17

    full reading [+] show sequence

    Nucleotide sequence: J033001M17 - full reading 
    GGCGGCGCGC GGCGGCCGGC GGCGAGCTCG GATCCCCACC TCCACCCCTC 
    CCGACTCCCA CGCCTTCCTC CTCCACTGCG ACCTACGGTG TAGGCGCATT 
    CCGCCTACGT GGCCTCGCCT CCGCCTCCGG TTCCTCCGCC ACGACGTGTC 
    CGCGTCCCGT CCACTCGCCC GATGAGGAAA TTTCCCTTCT GTACTGTTTC 
    GCACGACTCT TCCGCCGACG AATTCCCCCG CTTCCCCATT TCGTCTCGCG 
    GTGAGTTTTT GGTAGTTTAG TTTGATACAC CACTTCGTTT GATACCCTCG 
    GCGACCGCGC GGCGGCCAGC GGGCGCATCC ATGGCGGCGG CGGGATCCAT 
    AGGCGTGTAC AGGGCGGTGT TCGCGGCGCT GGGCGCTCTC ATGCTGGGCA 
    CCCTGGTGTA CACCTGCGTC ACCGACGGCT CGCCGTTTCG CCTCGAGCTG 
    CTCACCCCGT GGTTGGTGGC AACACTGATT GATTTTTATG TCAATGTGAC 
    TGCGATTTCG ACTTGGGTTA TCTACAAGGA AGTAAATTGG ATTAGTTCTT 
    TCTTTTGGGT AGTTCTGTTG TACTGTTTTG GCAGTATTGC TACATGTGCT 
    TATGTTGTTG TGAAGCTTTT TGAAATAAAA ACTTCCGGAC CTTCACAAGA 
    TCCACTTGAT CTTTTATTCC TCAGGCAAGG AGATCTATCC GAAAGAAAGT 
    CCTCTTTTGT CATAATTGGG AGAATTATTT TCAGCATTTT GGGGGCAATG 
    ATGGCTGCAG TCGTAATTTA TACTGTCATC ACTGATGGAC TACCTTTCAG 
    GAAGGACTTG TTGACCCCGT GGATGGCGGC AACCTTAATT GACTTCTATA 
    TAAATGTCTT CGCAATATCG GTATGGGTTG CTCACAAGGA GTCAAACTGG 
    ATATCTACTG CCATCTGGAT ATGCTTGTTA ATATGCTTTG GAAGCATCAC 
    GACATGTGGC TACATTGTCA TACAACTTTT CCAAGTGTCG TACCGAGACC 
    CAATCTATCA TGTGCCATTG AACTCTCATA ACAAGTATGG CATTGTTCCC 
    TCCCACTAAT CCCTGATCTT CTCCAAGCCT TGTTAGCTTG TGGTTGTCTA 
    AACTTTGCTT GACATATGGT CATTTATCTG GTATTTATAT GTCTGAAATG 
    TAGGAAGATT TGAAAATATC ATTGAAGAGT TATGTTATTC TTGGTATACA 
    ATAATATTAC CTCAATAAAT GGTGTATCGT CTAGACAAAT AGGGAATTCT 
    CGGTGTAATT ACATATCATT CTCAGTGTAA TGACATAACT TTGGCAATTT 
    CTCTACAAAA GGACCAGACT ATATGCAGTT TGCAGCTCCT

    Gene models with high sequence identity

    1. AT1G22750.4 [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009...
      E-value: 2e-53; Score: 207.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G22750.4

    Model type
    Protein coding
    Computational Description
    unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 186 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR