K09112

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09112

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09112

Determination of introduced cDNA(s)

  • J033129C22 - Rice Full-length cDNAs - Original: J033129C22

    full reading [+] show sequence

    Nucleotide sequence: J033129C22 - full reading 
    GGCCGTCCCC GCCGTCCACG CCGGCGCCGC GCTGAGCCGC CGACGTCGGG 
    GCGACTGCGA CTCCTCCTGT CGCCGCCAGC CTTCTCCAGT TCTCCCCTCT 
    GCCCGTCTCC GTTTGGCCGC CGCCCGCCTT CTCCTGCTCT TGGCTGCTCC 
    ACGCCTCCAC CGATCCGGCG CTCCACCCTT CAGCCCAGAG GATTGGTAAA 
    TTGTTACTGA TTAGTGATAT TGCGTCGTTA TTTCAGAACC ATGCGGCCGC 
    TTGTGGATGC TGACTACCCA AGGAAAAATT CCTAGCTACG CCACTACCCA 
    CCATCGCGGC CGCTGCTTTC CCCTCCCTGC CCCAAATGCT CCCGGCCACC 
    TCCACCGTCC CACCCACCTC GCCCCTTCCC CACTCCCGCG CTGCCCCGCG 
    CCGCCACCTC CGCGCAGGGC TTCTCCACGG GTCCGTGGCG ACGGCGGCGG 
    TGGTTCGGGC GTGCGGGGTG ACGACGGGCC ACCGTCGGAG GATGGGCTCG 
    GTTCGGGCGA GCCCCAGGGC AGGCGGATGG GAGGTGGCGA TGGCGGATAA 
    GGAGGGGGTA GGGGTGGAGC GGCTAGTGGA GGTGGCGCAG AGGGCGGCAG 
    ACGCCGCAGG GGAGGTGCTC AGGAAGTACT TCCGGCAACG CGTCGAGATC 
    ATCGACAAGG AGGATCAGAG TCCTGTAACT ATTGCAGATA GAGAAGCGGA 
    AGAAGCAATG GTGTCAGTCA TTCTGAAGAG CTTCCCTTCC CATGCCGTTT 
    TTGGTGAGGA AAATGGTTGG AGATGCGTGG AAAAGTCTGC TGATTATGTT 
    TGGGTTTTGG ACCCCATAGA TGGAACAAAA AGCTTCATAA CTGGCAAGCC 
    TCTGTTTGGT ACGCTTATTT CACTCTTGTA CAAGGGGAAG CCGGTTATTG 
    GCATCATTGA TCAGCCAATC TTGAGAGAAA GATGGGTTGG GGTTGATGGG 
    ATGAAAACAA CCTTAAATGG ACAAGAAATA TCTGTTCGCC CTTGCAATAT 
    CCTGGCACAA GCTTACTTAT ATACAACAAG TCCACATTTG TTTGCAGGAG 
    AAGCTGAAGA TGCATTTATT CGTGTACGGG ATAAGGTCAA AGTCCCACTG 
    TATGGTTGCG ATTGCTATGC CTATGCTCTT CTTGCCTCTG GTTTTGTAGA 
    TCTTGTTGTT GAATCAGGAT TGAAGCCATA TGATTTTCTC TCATTGGTAC 
    CAGTCATTGA AGGAGCTGGA GGTTCAATAA CAGATTGGAA AGGAAACAAG 
    CTCCATTGGC CTGTCTCTGC GGAATCACGG CCTGAAAGTT TCAATGTGGT 
    GGCATCTGGA GACGCCCGTG TCCACAAGCA GGCCCTTGAT GCGTTGCAAT 
    GGCACTAGTC TGCAAAACAC ATCCAAGTTT GGTCTCTAAA CAAACATGAA 
    TGTGTTATTC ATGTGTCCAA TAAACAGTGT ATTTTGTATG CTTGCGCCGT 
    GAGCGACTAG TTATTCAAAT TGCACTGCCA CTAATAAAAT CAATTTGATG 
    GTT

    Gene models with high sequence identity

    1. AT4G39120.1 [+] show detail - myo-inositol monophosphatase like 2
      E-value: 3e-114; Score: 409.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 7.4e-39
    Gene3D no description 1.8e-11
    HMMTigr Histidinol-phosphate phosphatase, putative, inositol monophosphatase 2.8e-128
    HMMPfam Inositol monophosphatase 2.5e-50
    HMMPanther MYO INOSITOL MONOPHOSPHATASE 9.9e-43
    HMMPanther Inositol monophosphatase 9.9e-43
    FPrintScan Inositol monophosphatase 5.7e-19
    FPrintScan Inositol monophosphatase 5.7e-19
    FPrintScan Inositol monophosphatase 5.7e-19
    FPrintScan Inositol monophosphatase 5.7e-19
    FPrintScan Inositol monophosphatase 5.7e-19
    superfamily Carbohydrate phosphatase 3.3e-70
    PatternScan Inositol monophosphatase, metal-binding site 0

    See the detailed result >

    AT4G39120.1

    Model type
    Protein coding
    Short Description
    myo-inositol monophosphatase like 2
    Curator Summary
    Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.
    Computational Description
    myo-inositol monophosphatase like 2 (IMPL2); FUNCTIONS IN: histidinol-phosphatase activity, 3'(2'),5'-bisphosphate nucleotidase activity, L-galactose-1-phosphate phosphatase activity, inositol or phosphatidylinositol phosphatase activity, inositol-1(or 4)-monophosphatase activity; INVOLVED IN: sulfur metabolic process, histidine biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Histidinol-phosphate phosphatase, putative, inositol monophosphatase (InterPro:IPR011809), Inositol monophosphatase (InterPro:IPR000760), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT3G02870.1); Has 15134 Blast hits to 15130 proteins in 2267 species: Archae - 157; Bacteria - 8374; Metazoa - 557; Fungi - 304; Plants - 238; Viruses - 0; Other Eukaryotes - 5504 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR