K09147

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09147

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: K09147

Determination of introduced cDNA(s)

  • J023039K07 - Rice Full-length cDNAs - Original: J023039K07

    full reading [+] show sequence

    Nucleotide sequence: J023039K07 - full reading 
    GGTGCGTGCG TGCGTGCGAC CGACCTGAAA ATCCAAAGCA CTCGCGTCGC 
    CGCGGCCTCT CCCTCCCTCC TCCGATCGCC GACGATGGCG CGCGCCGCCG 
    CCGCCACCGC CGCGGCGATC GCTCCGCATC TGGTTCCGGT GATTCGGGGC 
    GCCACTCCGT TCGCTCCCGC CGCCGCCACC GCCGCGGCGA TCTCTCTGCA 
    TCTGGTTCCG GTGATTCGGG GCGCCACTCC GTTCTCTTCC GCCGTCGCCG 
    CTGCCGCCGC CGCCGCCTCC ACCCCGGCAC GGTCATCCTC CGCCCTCACC 
    CAGACGCTCT CTTTCCCGAT CCAAGCTACC AGGTCCGCCG CCACCTCCAC 
    CCCACCATGG GCTTCCTCCG CACTCGCCCA GCCCCGCTAT TTCTCCACAA 
    GAGCTACCAG GTTAGCAAGC AAGAAAATGA TATTTATCTG AAGCAAACAG 
    TTTGTTCTTG CATGGTTGTT TTGGCACATC AAGAAAATAT GCCGTTTGCT 
    AGTTTGACGA AGATAAAAAT AGGAGGATGG GAGGAAGCTT ACTGGAAGCT 
    CAATCTCAGA ATTGACCATT TGAATGCTGT GATGAGGGAT GGGCAAGGTA 
    TGCAAGTGCA TCGGGAGGTG CTCAAGGTCG TGTCCGGTGG TGTCTGTATA 
    TTTTTTATTG TGGTCACTAT TCGTCATCTG AAGGAGACGT TTGCCCGTCG 
    CCGTGCTGGA CTCCCCTCTG TGATATCTGA TGGGCACAAG TGCTAGTGGA 
    GAGGGCAAAA GTGACTAGGA GAAGACAAGG CTACGAACGG AGGTGCAGAC 
    TAAAAGGCGG CGTGTATTGC GAGTGTGAAG AGGGACTGTG AAAACAAGTG 
    CTGCGGGAGT TGTATCGAAC GAATTTGAGA AGTAACGGCA TTAGATGGGT 
    TGGTTACCAG TGTAGTATTT TTGTTGCCAC GGTGAAAAGC AAGTTTGGAG 
    GCCCGCTAGA GATGCATATG TTTGTGGCAT TGAAAAGGTT TCTATGGCGC 
    CCAACAAATT CCTTTGCAAC ATGCTCGTCG TTCGCAGAAT CCCTCGTAGA 
    CACGTTGCTG ATCGAGCGGA CTAGTGTATC CGGGCATTTA CCTGTTGAGG 
    TGTTGTCGCC GCCGCCGCCG CTGAAGAAGG CGATGCGTTC GTCGGCGGCG 
    GCGGCGCCGC GGCTGGCGAA TATCAACGGG CCTCTGACCT TGAATCTCAG 
    TGAGCAGTTG CAGGGTTCCT GCTCATAGCG CTGGAGCATC AGTGAATACT 
    ACCATTGAAC ACCCCGGACC ATTTCATGTC ATACCTCTTG GTGAGTCCTT 
    ATTGGCCTGC AAATGAAGAA TTGTTTGAAG AATTCAGTAA TGCATTTTCC 
    ACGATTTTAG AGGTGGAAGA AGAGGGATAA TTTGTTGAAG TTTGACAATG 
    TTTTTCTTCC TGACGAAGCA GTCGTGGAAG AAGAGACGGA CGAGGCCGGG 
    GCCATTGCCG GGGTCGCGGA GGATGGCGGC GCGGACGACG TTGCGGACGA 
    GGTCCTCCGC CCTGGGGCAA GTATAGTTGT AGTATCCGAC CTGCAGCTGC 
    GCCTCCGACA AGGACAACGA CGCAATGGAG AAGAACAGGA TCGCCCACGC 
    TATGATCACC GGCGAGCCGT GACGACGAAC ACCGCGTGCT GCGCTGCACA 
    TCTTTCACTG CTATACCGTG TGTAGCTTTG ACGATCGCAG TGAAACTGAC 
    CGATGCGTCG GTGTTGATCG ATGCAGTGTG TAGGAGTAGT AGTGTAGTGG 
    TGCAGCAAAT TAAAGCAGGA GCTAGGCGTG ACGGTGATTT ATATACGTGG 
    ATCGATGGTG GATGTGCGTG CCGGGGTGAA GTGATTAGTG ACAGATGGAG 
    AGGGGAGCAG AGTTGACCTG GAAGGTACTC GTACCTCGGT AAACTGGAGA 
    CGTCACGTTG ATTACATGGC TTTCCCACCC GTTGCCGCGA CCCC

    Gene models with high sequence identity

    1. AT1G77100.1 [+] show detail - Peroxidase superfamily protein
      E-value: 6e-10; Score: 63.20

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Plant peroxidase 5.5e-07
    FPrintScan Plant peroxidase 5.5e-07
    HMMPfam Haem peroxidase, plant/fungal/bacterial 8.4e-05
    PatternScan Peroxidase, active site 0
    ProfileScan Haem peroxidase, plant/fungal/bacterial 13.296
    superfamily Haem peroxidase 7.1e-15
    Gene3D no description 5e-14

    See the detailed result >

    AT1G77100.1

    Model type
    Protein coding
    Short Description
    Peroxidase superfamily protein
    Computational Description
    Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G25980.1); Has 4380 Blast hits to 4357 proteins in 274 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 206; Plants - 4128; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR