K09209

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09209

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09209

Determination of introduced cDNA(s)

  • J013031I20 - Rice Full-length cDNAs - Original: J013031I20

    full reading [+] show sequence

    Nucleotide sequence: J013031I20 - full reading 
    TTTTTATGTG AAGAAAACAG CAATAGCGAC AACACAGACT GTACGGAAAT 
    TGTTGGTGAC ATATCCCAAG AAGACATCTC TGGCAGCTCT GATTCCTCTT 
    GCAATGGAAC TACAGAGGAT AAAGCTGAAA ACAACGAATC ACCTCCACTA 
    AAACCACCAA AATTCCAAAA GGGTGTCTTA CGGACGAACT GTATAGACTG 
    CTTGGATCGA ACAAATGTTG CCCAGTATGC CTATGGTTTA GCTGCTCTTG 
    GACATCAGTT GCATGTGCTT GGTTCTGTAG AATCCCCAGA ACTTGGTTTA 
    GATGACCCCT TGGCTCATCA TTTGATGCAC TTTTATGAGA GGATGGGTGA 
    CACCCTTGCG GTGCAATACA GTGGTTCGGC TGCTCATAAC AAGATATTCT 
    CTGCAAAGAG AGGTCATCTG AAGCTTTTTA TTCGATCACA AGAGTTCTTC 
    AGAACACTAC AACGGCACTA CAGCAATACC TGTATCGATG CTAACAAGCA 
    AGCAGCCATA AACTTATTTC TTGGCTACTT CCAACCACAG GAAGGAAAAC 
    CTGCACTCTG GGAGCTAGAG TCATCTTCGG TGGATCATAT CGCTGTGCAC 
    GCACGTACAA TAAAAAGAGT GAGATCAGAT GGCAGCATTC TTTATGGAAG 
    CAACACATCC ATATCTGGAT GTAGTGGTTG CCATAATGAA GACAAGGAGC 
    TGTTGAATGC AGCACCGCTT GATGTTAAAA GTGGGTCACA ATTTCCAGTG 
    TTGGAATCTG ATTCAGTACA TGGCAATGAA ATTTCATTGA CCTGTGAAAG 
    TGAGGTATCA AACTTAAGGT ATACACCTAT GATACCTCAG ACACATCATG 
    TTCCAGGCGG CGTTGAAACT GAAAGTAGCA TTCATTCTGG TGATTCAAAC 
    TTTCTGGATC TTGAATGGCT TTCAACTTCA GGCAACTCAA GCGATGAAAG 
    GTCCATTGCA ATTAGTACTC CAGATGTGAA CCTTTCAGCG GAGAATGTTA 
    TAAGTGGCAT AAATTCTGAG ACCATGGAAA ATCAAGATGC TGATATCTAT 
    ACTCAGAATT TACCTGAGCA TTTCGTGCAG TGGGTTAACC ACGGAGACAC 
    CTTTTGGTAT TAAAATTACC CGATGCTTGT GTCATGTACG CGGTACGCGT 
    TGGCTACTTT GAAGGCCAAA ACTTGTCTTT TCCAAGTGGT CATGAGACGG 
    GAATTGGTGA TTTGAGTAGG GAATTAGGAG TGAGAAGAGA TAGATGGCAC 
    AGCAAACTTC AGACATTCGC CTTGTGATAT ATGTCCACAT CATCCCATAG 
    CCCTCTTAGG AAAGTATAAC ATTCTGGTTA TTTGTTCCCA TCTTTCTTGT 
    AGGAGCAAGT AGATAGGCGT TTTTCTCAAT TTTTGAAAAG AAAGTAGAGG 
    TAGATTCATA TGGATATATA ATTTTTGTTC TTTCGAAAAA TGTACCATTG 
    TGGGAACATT CCGTTTGATA TGTAAATATT ATTTTATGCT T

    Gene models with high sequence identity

    1. AT3G43220.1 [+] show detail - Phosphoinositide phosphatase family protein
      E-value: 2e-62; Score: 237.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther PTHR11200 2.80000504261125e-72
    ProfileScan Synaptojanin, N-terminal 0
    HMMPanther PTHR11200:SF9 2.80000504261125e-72

    See the detailed result >

    AT3G43220.1

    Model type
    Protein coding
    Short Description
    Phosphoinositide phosphatase family protein
    Computational Description
    Phosphoinositide phosphatase family protein; CONTAINS InterPro DOMAIN/s: Synaptojanin, N-terminal (InterPro:IPR002013); BEST Arabidopsis thaliana protein match is: Phosphoinositide phosphatase family protein (TAIR:AT5G20840.1); Has 2131 Blast hits to 1660 proteins in 229 species: Archae - 0; Bacteria - 0; Metazoa - 800; Fungi - 658; Plants - 325; Viruses - 0; Other Eukaryotes - 348 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR