K09709

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K09709

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09709

Determination of introduced cDNA(s)

  • J013002F14 - Rice Full-length cDNAs - Original: J013002F14

    full reading [+] show sequence

    Nucleotide sequence: J013002F14 - full reading 
    GCTTTCTCCT ACGCGGCCGG AGAGAGGAGG GGGGAAGAGA GGATCTCGCA 
    GAGCGCCATA GCCTCGGATC CAGAAGCGGA ATTCGGTGGA GGTCTCGGGC 
    ACCTGGATCG ATCGGAGGAA GGGAAGGCGG AGCAGCGGTG ATGGGGAAGG 
    CGGCGGCGGT GGGGACGGCG GTGGTGGTGG CCGCGGCGGT CGGGGTGGCG 
    GTGGTGCTGG CGCGGAGGCG GAGGAGGAGG GACCTGGAGC TGGTGGAGGG 
    AGCCGCGGCG GAGAGGAAGA GGAAGGTGGC GGCGGTGATC GAGGACGTGG 
    AGCACGCGCT GTCGACCCCG ACGGCGCTGC TGCGGGGCAT CTCGGACGCC 
    ATGGTCACCG AGATGGAGCG AGGCCTGCGC GGGGACAGCC ACGCCATGGT 
    TAAGATGCTC ATCACCTACG TCGACAACCT CCCCACCGGA AATGAACAGG 
    GGTTGTTTTA TGCATTGGAT CTTGGAGGAA CCAACTTCCG CGTCCTGCGA 
    GTCCAACTCG GTGGCAAGGA GAAACGTGTC GTCCAACAAC AGTACGAGGA 
    AGTCTCAATT CCACCACATC TGATGGTTGG AACTTCCATG GAACTGTTTG 
    ATTTTATTGC TTCTGCATTG TCAAAATTTG TTGATACTGA AGGTGATGAT 
    TTCCACCCCC CAGAAGGGAG ACAGAGAGAG CTGGGCTTCA CCTTTTCCTT 
    CCCAGTGAGC CAGACATCAA TATCGTCAGG AACGCTCATC AAGTGGACAA 
    AGGGTTTCTC CATCAATGAC GCGGTTGGCG AAGATGTTGT ATCTGAGTTG 
    GGCAAGGCCA TGGAGAGGCA GGGATTAGAT ATGAAAATTG CAGCATTGGT 
    TAATGACACT GTCGGCACAT TGGCTGGTGG GAGGTATGCG GATAACAGTG 
    TTGTTGCTGC TATAATATTG GGCACTGGTA CAAATGCAGC ATATGTTGAG 
    AATGCTAATG CAATTCCTAA ATGGACCGGT TTACTGCCTA GGTCCGGAAA 
    TATGGTAATC AACACAGAAT GGGGGAGCTT TAAATCAGAT AAGCTTCCTC 
    TTTCAGAATT CGATAAAGCA ATGGATTTTG AAAGCTTGAA TCCTGGAGAG 
    CAGATATATG AAAAGTTGAT TTCTGGCATG TATCTTGGAG AGATAGTGCG 
    AAGAATCTTG CTGAAGCTTG CTCATGATGC AGCTTTGTTT GGGGATGTTG 
    TTCCATCTAA GCTAGAGCAA CCGTTTGTAC TAAGGACACC GGATATGTCA 
    GCCATGCATC ATGACTCGTC ACATGACCTT AAAACTGTTG GAGCTAAGCT 
    AAAGGATATC GTCGGGGTCC CAGATACTTC CCTGGAAGTA AGATACATTA 
    CCAGTCACAT TTGTGACATA GTTGCAGAGC GTGCTGCACG CTTGGCTGCT 
    GCTGGCATAT ATGGGGTCCT AAAGAAGCTA GGTCGGGACA AGATGCCAAA 
    AGACGGCAGT AAGATGCCTA GGACTGTCAT TGCCTTGGAT GGTGGGCTCT 
    ATGAACATTA CAAGAAGTTC AGCAGTTGCT TAGAATCAAC TCTAACAGAC 
    CTTCTTGGGG ATGATGTCTC GTCTTCGGTG GTTACCAAGC TGGCCAACGA 
    TGGTTCTGGC ATTGGAGCTG CTCTTCTCGC AGCCTCGCAC TCCCAGTATG 
    CCGAGATCGA CTAGCTTTAA GGATGATCTT GATGAATGAT GAATCAAACT 
    CCGTTTGTAG GTTCTCATTT CCCCCTTCAA AATCCACATA ATACTCCTGG 
    CTCCCCCCTT GAAATCTTAC CATCTTTTTT TGGCTATTCT GAGGGCAAAC 
    ATAAGTGCCT CTGCAGCGGG ATATAGCTAG TATAGCGCCA ATGAGTTTGG 
    AGGTTTTCTA ATGGCATAAA ACGTTGGATG GCAGTAGCAG ACTAACAGGG 
    AAATGGAGGC ACAGGCAATT TCCATTCCTG TTCTGTCAGA TTCTTTTCCC 
    CCTTAATTGA TGTTGAGAAC CAAGATTTTT TTGCTCTGTA TTTTCTCTTC 
    GTAATAAAGA AGGGGACATA ATCTAATTGC TCC

    Gene models with high sequence identity

    1. AT4G29130.1 [+] show detail - hexokinase 1
      E-value: 2e-171; Score: 599.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther Hexokinase 1.6e-210
    Gene3D no description 6.5e-86
    PatternScan Hexokinase, conserved site 0
    HMMPfam Hexokinase 5.2e-67
    HMMPfam Hexokinase 6e-62
    FPrintScan Hexokinase 1.6e-65
    FPrintScan Hexokinase 1.6e-65
    FPrintScan Hexokinase 1.6e-65
    FPrintScan Hexokinase 1.6e-65
    FPrintScan Hexokinase 1.6e-65
    FPrintScan Hexokinase 1.6e-65
    FPrintScan Hexokinase 1.6e-65
    superfamily Actin-like ATPase domain 2.3e-76
    superfamily Actin-like ATPase domain 1.9e-71

    See the detailed result >

    AT4G29130.1

    Model type
    Protein coding
    Short Description
    hexokinase 1
    Curator Summary
    Encodes a hexokinase (HXK1) in the plant glucose-signaling network. Functions as a glucose sensor to interrelate nutrient, light, and hormone signaling networks for controlling growth and development in response to the changing environment.
    Computational Description
    hexokinase 1 (HXK1); FUNCTIONS IN: fructokinase activity, hexokinase activity, glucokinase activity, zinc ion binding, ATP binding; INVOLVED IN: sugar mediated signaling pathway, hexose catabolic process, glucose mediated signaling pathway, programmed cell death; LOCATED IN: in 6 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Hexokinase, N-terminal (InterPro:IPR022672), Hexokinase, conserved site (InterPro:IPR019807), Hexokinase, C-terminal (InterPro:IPR022673), Hexokinase (InterPro:IPR001312); BEST Arabidopsis thaliana protein match is: hexokinase 2 (TAIR:AT2G19860.1); Has 2426 Blast hits to 2148 proteins in 325 species: Archae - 0; Bacteria - 92; Metazoa - 1300; Fungi - 606; Plants - 290; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR