K09934

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	rosette leaf (PO:0000014)	increased length (PATO:0000573) (Rosette leaf::Shape::long) increased width (PATO:0000600) (Rosette leaf::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K09934

Determination of introduced cDNA(s)

J033146A06 - Rice Full-length cDNAs - Original: J033146A06

full reading [+] show sequence

GAGAGGCCGG AAAACTCTTT CGCCGACCTT CCCCACACGG CTTCACCCTA 
AGCCAGTGAG CCCAGGCGGC GGCGGCGGCG GGGCGGAATG GCGGAGCCGG 
ACTGGATCCT GGAGAGGGAG CGGAGGCAGG TGGAGCAGAT CCTGGAGCTT 
GACATGGAGG AGCTCCAGGT CGAGGAGGTC GACGACGCCG GCTCATCCTC 
CTCCTCCGAA GTCGACACCT TTCTCAGAAA CACTCATGGG GATGGAGGAT 
CTAGAACTTC TGAAGCACTT GCATTCAATA CGTCTGTGGT TTCGCTGCCC 
ACCTGTGATG GTGAGGTTCA TGATGCCCCA GGCAGATTTG CTTTCTTGGA 
TGGTGGTGTG GTTCTCTGTT TACCAATGTT TTATCTTCAA GGTGTTGTTT 
TGTTTCCTGA AGCTATCCTG CCTATTAGAG TAGTTCAGCC TAGATCTTTG 
ACAGCTGTTG ACAAGGCTGT CAATCATGTT GACGCTCCAT GCATGATAGG 
TGTGGTTCAT GTTTATCAAC ACACTAATGA TGGACACCAT GCTATTGCTT 
CAGTTGGGAC AACAGCGGAG ATACATCACA TTAAACAACT TGATGATGGC 
TCATCAAATG TTGTCACACG TGGTCAGAAC CGTTTTCGCC TTAGACGCCG 
TTGGATCGAT GCTGATGACG TTCAATGGGG TGAAGTACAA ATTATCGAAG 
AAGATACACC TCAGAGAACT CCAAGAGATG CATTTGGCCA GTTAGCTACA 
AATTATATTT TCAACCAGTG TGGCACATCG TTACTCAGTT TGGGTACATC 
TTGTTTCAGA CAAGATGATC ATGTGAACTC TGATCAAGAT TGGGATTCTC 
TATCATCCAC TAGTACTTCA AGTGAACATT CAGTAACAGA TGCAAGAACA 
TACTGTTCCT CAAATGAAGA TGAAGATCTC ATGCTTGAAC AGTCTTGGCA 
GAAGTATGAT TCTGTGAAAA GAAATGCTGA ATTAGAGAAT CCAGTCAAGC 
ATAGCAACAC AAGAGGCAAG GGTGAACCTT GCTTTCAATC CCCAAAATCT 
TTACCAACAA AAAACAAAGG TGCTGAACAA CGCAGGCGGT TCTGTGCTGC 
TTATAGTTCA AAGCTGGCAT TGCAGGCTCC ATTGTCATTT TGGCCTCGCT 
GGGCTTATGA AATGTACGAT TCATATTCCC TTGCTCGCAG AGTGGCAGAT 
TTGTGGAGAC AAATAGTTGT AAATCCAAGC ATGGATGATT ATGTGAGAAA 
ACCAGATATT TTGTCATATC ACATTGGAAG CAAACTTCCC ATGTCATGTT 
CTGTGAGACA AGAATTGCTT GAGATCGATG GTATCTCATA TCGGCTACAG 
AAAGAGATCC AGCTACTCAA GGCCTTTAAC ATCATAAGAT GCAGAAATTG 
CCTGGCTCTT ATCTCAAGAC GTAGTGATGG CCCTGTCGGT GCTTATGTCA 
AGCAGTTCAG CTGTGGGCAA GAGATGATGA CAGTGTACAA TGCAACTGGT 
CTTGCACTCC GTGGCGCTCC TTCCAAAGCT CACAGTTTGT TTCCAGGTTA 
TACGTGGACG ATTGCTCTCT GTGCTGCCTG TGAGTCCAAC ATAGGCTGGC 
TGTTCAGGGC GGAGAAGACA AATCTGCTTC CAAAATCCTT CTGGGGATTA 
CGCAGCTCCC AAGTTTCAGA TGACACACAA TCAGGACATA ACTGAACCTT 
AACATTATGA CAGGAATGTA AAAGCAATAC TCAATGTATA TTCTTATAAT 
ACAATACGCG ATGTATAGAT GGATGTTCAG AGTTCAGACA TGTTGCAGCA 
GTCTAAAGTA AATGTGAGCA ATGCAGAATG CACCCTCCAT ATCACTGAAA 
GGGAAGGTCA GCTTACCTCT CCTGCGCCAA AGAATAAGAA TGTGTGATCA 
GCTAAAGTCC CACTGACAAA TTTCTGAGCA GCAATGAGGC CTGCAAGCAC 
TACAGCAGCC GTTCCCTGTT TACACCACAG TTTCATGGTT TACTCCTATT 
GTTGTGAAAC CCAGTATAAA TGCACATTCA CTAGTTCGCT TTCATTTAGG 
AACTGTAACG AGACCAATAC GAAGAGTAAA AAAGTGAGAT CTGAACCTAC 
TACCTGAATA TCATCATTGA AGACAAGATT GTTTGC

Gene models with high sequence identity

AT2G25740.1 [+] show detail - ATP-dependent protease La (LON) domain protein
E-value: 6e-116; Score: 415.00

InterPro Scan Digest

Program	Description	E-value
HMMSmart	Peptidase S16, lon N-terminal	7.9e-19
HMMPfam	Peptidase S16, lon N-terminal	3.1e-30
HMMPanther	ATP-DEPENDENT PROTEASE (CEREBLON)	2.4e-19

See the detailed result >

AT2G25740.1

Model type: Protein coding
Short Description: ATP-dependent protease La (LON) domain protein
Computational Description: ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); Has 2345 Blast hits to 2258 proteins in 710 species: Archae - 0; Bacteria - 1319; Metazoa - 281; Fungi - 6; Plants - 99; Viruses - 0; Other Eukaryotes - 640 (source: NCBI BLink).
Link: InterPro Scan - TAIR