K10019

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10019

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10019

Determination of introduced cDNA(s)

J033067M09 - Rice Full-length cDNAs - Original: J033067M09

full reading [+] show sequence

TTGGGGCCGG CACACCGTGC GCTGTGCTCC ACTCCACCAT CGCTCGCGAC 
CCGCGCCCAC GCCCGCGCAC CACCACACCA CACCATACCA CACCACGGCC 
ATCTCGTCAG TCAGTGTGAC CCATCCGGCC ATCCCACCGC GCCCTCCCCC 
TCCCATCGCT GTCGTCCACG GCACCGCGTC GCGTTTGGGG TCTCCCACCG 
TTCTCTCCCG CACGCGCGCG GTCCCGCCTC CCGCCTATCT CTATCCGCAG 
ATCCACAACC ATCCATCTCC ATTCGCCATT TCCGCCCACT GCCACGCCAA 
CGCCACTGCT GCTAAGCTCC GCCTCGTCTT CCGCCCACGC TGCTCTGCTC 
GTCGTCGCTC TCGCTCGCAG TGCCCCGCGC GCGCGAACGA GGCGTGGTGG 
GGGGGTAATG GCGCCTCCTC CGTACGCAGC CGCGGTGGTG GTGGCGACCG 
TCGCCGTGCT GGTGCTGGTG TCGCAGGTCT CAGTGGCCGC CGGCGCGGAC 
TGCCGCTTCC CGGCCGTGTT CAACTTCGGC GACTCCAACT CCGACACGGG 
CGGGCTGTCG GCCACCTTCG GCGCCGCGCC GCCGCCCAAC GGCAGGACCT 
TCTTCGGCAT GCCCGTCGGC CGCTACTGCG ACGGCCGCCT CGTCATCGAC 
TTCATCGCTG AAAGCCTGGG ACTGCCTTAC CTCAGTGCGT ACCTCAACTC 
GATAGGAAGT AACTTCACAC AAGGTGCTAA CTTTGCAACG GCCGGGTCGT 
CAATCAGAAG GCAGAACACA TCTTTGTTCC TCTCTGGTTT CAGCCCCATT 
TCCTTGGACG TGCAGTCCTG GGAGTTTGAA CAGTTCATCA ACAGAAGCCA 
GTTCGTCTAT AACAACAAAG GTGGAATCTA CAGGGAGCTC CTACCCAAGG 
CTGAATACTT CTCTCAGGCG CTCTACACAT TCGATATCGG CCAGAATGAC 
ATTACCACAG GCTTCTTCAT AAACATGACC TCTGAACAAG TCATAGCTTA 
CATCCCTGAT CTAATGGAAA GGCTCACGAA CATAATCCAG AATGTGTACG 
GTCTCGGAGG AAGGTACTTC TGGATTCACA ACACGGGGCC GATCGGCTGC 
CTGCCTTACG CCATGGTGCA CCGCCCCGAC CTCGCCGTCG TCAAGGACGG 
GTCCGGCTGC TCCGTCGCCT ACAACGAGGT CGCCCAGCTC TTCAACCAGA 
GGCTGAAGGA AACCGTGGGC CACCTCCGGA AGACCCACGC CGACGCCGCG 
TTCACCTACG TCGACGTCTA CTCCGCCAAG TACAAGCTGA TCAGCGACGC 
CAAGAAGCTC GGGATGGATG ACCCGATGCT GACGTGCTGC GGCTACGGCG 
GCGGGAGGTA CAACTTCGAC GACAGGGTCG GGTGCGGCGG GAAGGTGAAG 
GTGAACGGGA CGTGGGTGGT GGCGGGGAAG TCGTGCGACG ACCCGCTGAA 
GCGGGTGAGC TGGGACGGCG TGCACTTCAC CGAGGCGGCG AACAAGTTCG 
TGTTCGACCA GATCGCCGGC GGCAAGCTCT CCGACCCGCC GGTGCCTCTC 
AGGCAGGCCT GCCAGATCAG CAGAGGGCAG TGAATCGTCG CCGCCGGTGC 
GGGTGCATCG AGCCGTCGTC AGGTTGGCTG TGCCGTACTG CCATTTCTGC 
TGCTGCTGCT GCCTCTGGCT TTGTAAGTGT GCAATATTGC AGAGGCATAT 
GGTTGATATA AAGTACATAT ACTGCTTCCT TTGTGCAATA AAGGGAGAAT 
GAGATTC

Gene models with high sequence identity

AT3G26430.1 [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
E-value: 2e-125; Score: 446.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	LATERAL SIGNALING TARGET PROTEIN 2	1.8e-05
HMMPanther	ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN	1.8e-05
HMMPfam	Lipase, GDSL	1.9e-41

See the detailed result >

AT3G26430.1

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: alpha-fucosidase 1 (TAIR:AT1G67830.1); Has 3218 Blast hits to 3172 proteins in 104 species: Archae - 0; Bacteria - 74; Metazoa - 0; Fungi - 6; Plants - 3136; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR