K10135

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10135

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10135

Determination of introduced cDNA(s)

  • J033126A02 - Rice Full-length cDNAs - Original: J033126A02

    full reading [+] show sequence

    Nucleotide sequence: J033126A02 - full reading
    GAGTGCAAGC TAGAAGCCTT GTTCCATACT TGCTCACTAG TTAGCTAGGA 
    CATGGAAAAG TCTGAGCTCT TGCTAGGATC GTATTCATAT GCAGCTCTAT
    GTGGTGTCAC ACTCATCATA GGATGGTTAG CTCACTGGGT ATACAAATGG
    ATGAATCCTC CATGCATTGG GAGGCTTCCT CCTGGCTCCA TGGGCTTCCC
    TATTATTGGT GAGACCTTCC AGTTCTTCAG AGCAAGCCCA TCAATAGACA
    TGCCAAGCTA CTACAAGCAA AGACTGGAGA GGTATGGGCC TCTATTCAAG
    ACTAGCTTAG TTGGACGGCC AGTGATCATT TCCCTTGACC CAGAGGTGAA
    CCGATTCATA TTTCAACAAG AGGGTAAATT GTTCCAAAGT TGGTATCCAG
    AAACTGCAAT TAATATCTTT GGCAAGAAGA GCCTCACCAC ATACAACGGA
    ACCATTCACA AGTTTATCCG GGGTGTCGCG GCCAAGCTCT TTGGCCTTGA
    AAACCTGAAA GAATCACTCC TTCCTGAGCT AGAAAACTCT ATGAGGGAGA
    GCTTCGCATC ATGGACTGGG AAACCCAGCG TCGAGGTACA GGACGGCGTG
    TCAGACATGA TCTTTGACCT AGTTGCCAAG AAGTTGATCG GACTCGATGT
    CACCAACTCA AGAGAATTGA GAAAGAACTT TCAGGACTTC TTTCAGGGGA
    TGGTTTCCTT CCCAATATAT TTTCCAGGGA CATCATTCTA CCGATCCATG
    CAGGGTAGGA GAAATGTGCG GAACACACTT ACTGATATAA TGAAAGAGAG
    GCTAAGTGCA CCTGGAAAGA AGTATGGTGA CCTTGTAGAC CTCATTGTTG
    AAGAGCTACA GAGCGAAAAG CCAATGATCG ATGAAAACTT TGCTATAGAC
    GCACTTGCTG CGCTCTTGTT TACGAGCTTT GCAACACTGT CATCAACCTT
    GACTGTAGCT TTTAAGTACC TAACCGACAA TCCAAAAGTT GTTGAAGAGC
    TCAAGGAGGA GCACGGGACA ATTCTAAAGA AGCGAGAAGG TGTGAATTCC
    GGGTTCACAT GGGAGGAGTA CAGGTCCTTG AAATTCAGTA CTCAGGTTAT
    GAATGAAATT ACTCGAATTA GTAACGTCAC ACCTGGAGTT TTCAGGAAAA
    CATTAACAGA TGTGCAAGTG AAAGGATATA CAATTCCATC CGGGTGGTTA
    GTCATGATAA GCCCCATGGC AGTTCACCTA AACCCAAAAT TGTTCGAGGA
    TCCACTTAAA TTTGATCCAT GGAGGTGGAG GGAGGAGAAG AGAAGCTCGA
    TGCTGAAAAA TTACATGCCA TTTGGAGGAG GCGTCAGGCT GTGTCTCGGG
    GCAGAGTTTA GCAAGCTTTT CATTGCACTC TTCCTCCACA TCTTGGTGAC
    CGAGTATAGT TGGACGGAGA TTGAAGGAGG GGAAGTACTG CGCATATCAG
    AGATCATGTT CCCTCAAGGC TATCACATCC AACTAGTTCC TCAGACTTAA
    TATACCTATT GGATATTCCA CTGTTGTAAT AATAAAGAAA TTGTGAACCC
    AATAACTTGT TGCGTATGAT ATCTATATTG TAACTATGAA ATAAACAGCT
    CGTGTGTCTT CAGTTTC

    Gene models with high sequence identity

    1. AT1G12740.1 [+] show detail - cytochrome P450, family 87, subfamily A, polypeptide 2
      E-value: 3e-131; Score: 466.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Cytochrome P450, conserved site 0
    FPrintScan Cytochrome P450, E-class, group IV 5e-17
    FPrintScan Cytochrome P450, E-class, group IV 5e-17
    FPrintScan Cytochrome P450, E-class, group IV 5e-17
    FPrintScan Cytochrome P450, E-class, group IV 5e-17
    FPrintScan Cytochrome P450, E-class, group IV 5e-17
    HMMPfam Cytochrome P450 1.4e-58
    Gene3D Cytochrome P450 4.3e-85
    superfamily Cytochrome P450 2.7e-91
    HMMPanther CYTOCHROME P450 PLANT 2.8e-227
    HMMPanther Cytochrome P450 2.8e-227

    See the detailed result >

    AT1G12740.1

    Model type
    Protein coding
    Short Description
    cytochrome P450, family 87, subfamily A, polypeptide 2
    Curator Summary
    encodes a protein with cytochrome P450 domain
    Computational Description
    "cytochrome P450, family 87, subfamily A, polypeptide 2" (CYP87A2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 3 (TAIR:AT1G78490.1); Has 31076 Blast hits to 30988 proteins in 1655 species: Archae - 56; Bacteria - 5533; Metazoa - 10873; Fungi - 5392; Plants - 7791; Viruses - 3; Other Eukaryotes - 1428 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR