K10632

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K10632

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K10632

Determination of introduced cDNA(s)

J023011G21 - Rice Full-length cDNAs - Original: J023011G21

full reading [+] show sequence

GTAGGAATTG AAGGATGATG CTGCTCGCCA AGGAGTTGGG CCTGTCGCCG 
CCGGCAGCGG TCACTCCTCG CCGGAGGCCG CCGCCTGCCA GGGTCCCCGC 
CTCTCCCTCC GGTGGCTCGC CCGTGGCCGT CGGAGACCTC TGGCTCCGGA 
CCAAAGGAGC CGGAGGAGGA GGAGACGGGT TCGGGAGCCA CAGCCACGAG 
AGCGAGATGG ATTTGGCCAT GCTCGTCACC GACTTCCTTG AGAACGGCGG 
CACCGGAGGC GCCGATTCCC GCGCCAGCAG CGACTCCGAC TCCGCCCTCT 
CCGACCACCT CGCCGATAAC ATTTCTATCT ACAAGCAAGG CGGCGATGAG 
AAAGAAAACG AGCTACTCTC CATGGTCCAC TCGCTGTTAT TCTCGATCCA 
TGAGTCAGAC CTTCTGGCTT TCAAAAGAGG TCAATGCAGT GCCAGCTGCA 
TCCGTCATTT ACTTGTGAAG CTCTTGAGAT ATTCGGGATA TGATGCAGCT 
GTTTGCGTAT CAAAATGGCA GGGATTCGAC AAGATACCTG GAGGTGATCA 
TGAGTATATC GATGTCATCA TGAATAGTGA TACTGAATAT CGTCTGATCA 
TTGATATCGA CTTCAGGAGC CACTTTGAAA TAGCCAGGGC TGTTGATTCT 
TATGACAGTC TGCTCAATTC ACTTCCGGTG GTCTATGTTG GCACTCTTCC 
CAGACTGAAA CAGTTCTTGC ATGTTATGGT AGATGCTGCA AAATGGTCGC 
TTAAGCAGAA CTCTATGCCT CTGCCTCCTT GGAGATCCTT GCCTTATCTC 
CAAGCAAAAT GGCATTCCAA GTATGAGAGG ATAGACCTGC ACATTGAGCA 
AGACTTCCGC AGCACAGCTT CAGATCACGC ACTATGCATT GGGCACCTCA 
AAAGGCTGAA ATCCTCCCTG CAGTCAGAAC TGGATACCGA AAGGTTGCTT 
ATGATGCCAA TCAAGACTGA TATGAAGCGG AGGGCAAAGT TTGAGAGGCG 
GCGGCGCCGT TCCTTGCTCA GCTTCTGATT CATATTTGTG CTTCTTGGAT 
ACTGAAGTAC TGAGAGAAGG AAGAATAGCT TCCCATACTT TTTTTCTGTG 
ATAAAAGGAG TTCTTTTTAA CAGTTTTGGA CATACAAGGG AAATAGATGA 
CGGGTACTAA CAAGGCAGGA GAGTTGAGAG AGTGTGCCAG CTTTTTTTTG 
AAGGCATATA CAAAAACATA AAATTCTTTT TGGATTTCAT TTTTGTTCTT 
CCGGCGATGA TGGCTGCTAG TGGTTAATCT GCTGCATACC ATGTACAATG 
ATGAGTGTTT ACAGCGTTTT TTTCCTCCTT ATATTCATTC TTTTATCACA 
TAGATGGACC TTGTGTATTT TGAACACACT TCCTTTTCCC CCTTGTTGTA 
GAGTGGACAT GATACATGCT GTTGGTTCCC TTTGTAATAA TAGAATGTTC 
AAGCTTAGTT ACACTCTGTT TTGAAATGAT ATACTCTAAA ATGTTCTGGC 
TT

Gene models with high sequence identity

AT2G39650.1 [+] show detail - Protein of unknown function (DUF506)
E-value: 1e-67; Score: 254.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF506, plant	1.4e-60
HMMTigr	Protein of unknown function DUF506, plant	7.7e-71

See the detailed result >

AT2G39650.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF506)
Computational Description: Protein of unknown function (DUF506) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF506, plant (InterPro:IPR006502); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF506) (TAIR:AT2G38820.2); Has 395 Blast hits to 393 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 393; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR