K11017

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K11017

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K11017

Determination of introduced cDNA(s)

  • J013071K14 - Rice Full-length cDNAs - Original: J013071K14

    full reading [+] show sequence

    Nucleotide sequence: J013071K14 - full reading 
    TCCCCGTGCA GTTGCCAGTT GATTGGTTCA GCGTGGCTGC GCGCGGCGCG 
    GGGCGGACGG GCAGACGCGA TCGACGACAG GCACCGGCTC CGGCTCCATG 
    GCGCGCCTCC TTCTTCTGCT CGTGCTCATC GGCGGCATCT GCGCCGCCGC 
    CGCGGCGAGC TCGCCGCTAC TCCCGGCGGC GGAGACGATG CGCGTGAGCT 
    TCGCGGGGAA GTCGGAGTTC AGGACGGTGA ACAGGAAGCC GCTGGGTACG 
    TGCCTGGACC CGAGCCCGTA CCTGGAGATC AGCGTCAGCA CCGGCGGGGC 
    GCCGCTCCCC GACGAGGCGT TCCTCAACGT GACCGTCTCC GGCGTCCGCA 
    GGCCCGACCG CTCCCACTGG CTCGCCATGA TCACGCCTTC AAACTCCAGT 
    GTCTTGGGGT GCCCTCTGAA CGGTGTCAAT TACATCGAGA CAGGTGATCT 
    GGCGAGCCTC CCTCTTCTGT GCCACTACCC TGTCAAGGCC CAGTACCTGA 
    CAAGCGACCC GGGCTACCTG GGCTGCAAGG CCTCGGCGTG CCAGAAGCGC 
    CGCGCGTCCG GCACCTGCAA GGTCCGGACC TGCGCCGCCA CGCTGGCGTT 
    CCACGTCATC AACTTCCGCA CCGACGTCGA GTTCGTCCTC TTCTCCGGCG 
    GCTTCGCGAC GCCGTGCGTC CTCAAGCGCT CCGGTGCGCT CCCGTTCGCC 
    AACCCCGCCA AGCCGCTCCA CGGCCACCTC TCCAGCGTCG ACTCCAAGGC 
    CACCTCGATG AGGCTTACGT GGGTGAGCGG AGACGCGAGG CCGCAGCAGG 
    TTCAGTACGG GACGGGCAAG ACTGCTACCT CTGTCGCCAC GACATTCACT 
    CATAAGGACA TGTGCAGCAT CGCCGTGCTG CCGAGTCCTG CGAAGGACTT 
    CGGGTGGCAT GATCCGGGTT ACATCCATTC GGCACTCATG ACCGGTCTCC 
    AGCCATCTCA GTCCTACAAT TACCGTTACG GAAGTGATTC CGTGGGTTGG 
    AGTAACACAA CCGAATTCAG AACCCCACCA GCTGCAGGTT CAGGCGAGCT 
    GTCCTTCGTG ATCTTTGGTG ATATGGGGAA GGCTCCACTG GACCCATCAG 
    TGGAACACTA CATTCAGCCT GGATCGACCT CCGTGGCCAA AGCAGTAGCT 
    GCAGAGATGC AAACCGGAAA GGTCGACTCG ATCTTCCACA TCGGAGACAT 
    CAGCTACGCC ACGGGCTTCC TTGTCGAATG GGATTTCTTC CTTCACCTCA 
    TCACGCCGCT CGCGTCGCAG GTGTCCTACA TGACCGCCAT TGGTAACCAC 
    GAGAGAGACT ATGCAGGATC TGGATCGGTA TATCCGACGC CGGATTCAGG 
    CGGCGAATGT GGAGTCCCCT ACGAGTCCTA CTTCCCCATG CCTGCTTCCG 
    GTAGGGACAA ACCATGGTAT TCGATCGAGC AAGGGAGCGT TCACTTCGTT 
    GTGATGTCCA CCGAGCACGA GTGGTCAGAG AAGTCAGACC AATACAATTG 
    GATGGAAATG GATTTGTCAT CGGTTGATAG ATCAAGAACA CCATGGGTGA 
    TCTTCATTGG GCATAGACCA ATGTATTCAT CCAGCAGCGG TATTCCGCCC 
    AGCGTTGATC CGAACTTCGT TTCCTCTGTT GAGCCACTCT TGCTTAACCA 
    CAAGGTCGAT TTGGTCTTCT TTGGCCATGT ACACAACTAC GAGAGAACGT 
    GTGCGGTATA CCAGGGCAAT TGCAAAGGCA TGCCAAAGAA GGACGCAAAA 
    GGAGTTGATA CCTACGATAA CAGCAACTAC GCCGCACCTG TTCATGCCGT 
    TGTTGGAGCA GGGGGGTTCA ACTTGGATGG CTTCCCTAAG ATTGGTCTGC 
    ATAGCTGGAG CTTATCAAGG ATTTCAGAGT TTGGATATGC CAGGGTACAT 
    GCGACGAAAA CTGATATGTT GGTTCAGTTT GTAAACTCGA ACACGTCGGC 
    AGTCCAGGAC CAATTTAGGA TTGTGAAGGG AGCCAGATGA TCCAACCTTA 
    CAAGCAACTT GATATTCACA AGGAGAAACA GTAGCTACTT TTTTTTATTT 
    GTTAGTATAT ATAGCTAGGT ACGCTGTAAA TAGATGCTGA ATTACACACA 
    TAAATGCTAT AGACTATCAG GCTGTGTACG CGGCTACAAT AAAATTAATA 
    CTATCATTTT TCTCCCTG

    Gene models with high sequence identity

    1. AT5G50400.1 [+] show detail - purple acid phosphatase 27
      E-value: 3e-90; Score: 330.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Metallo-dependent phosphatases 2.7e-59
    superfamily Purple acid phosphatase-like, N-terminal 2.3e-19
    HMMPfam Metallophosphoesterase 3.9e-19
    Gene3D Purple acid phosphatase, N-terminal 2e-06
    Gene3D no description 1.5e-70
    HMMPanther ACID PHOSPHATASE RELATED 1.9e-73

    See the detailed result >

    AT5G50400.1

    Model type
    Protein coding
    Short Description
    purple acid phosphatase 27
    Computational Description
    purple acid phosphatase 27 (PAP27); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 24 (TAIR:AT4G24890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR