K12834

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K12834

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K12834

Determination of introduced cDNA(s)

J033093F17 - Rice Full-length cDNAs - Original: J033093F17

full reading [+] show sequence

GAGGTGTGTG AGGGAGTTTG CACTGCAGCA CTGGTTACTG GTTACTGAGA 
CATCATCCCA ACATAAATCT GCGATGTGGT GTTTCACTCC CCATTTTTTA 
AGATTATGTT TCGATTCCGA CGTTAATTAC GTTTCTCAGT GTATCAATCT 
GTGGATCATG CTCGCAGTAC TTAATTTTGT TAGTGTAATA ATCTGTGGAT 
CATGCGGTCC TTAATTTTGT TAAGAGTCCT GAATTTTGCT GCTGATTAGA 
ATGTTATAAA CATAACTGCA GGCATAGGCA GCATTATCTG TCGTTGTTCT 
GCTAATTAAT CTCGTAGCAT TATTTACGAT TGCTCTGATA AAGTCGCATC 
TGAAAAGTCT CACATGCTTT GAGTGTTGAT GTTTAAATGT TGTAAAACAT 
ATCCCCTATA AACATAGAGG GTTGTTATTT TGCTAGTTAT CATTTATTTG 
TCATTTATTT TGCTAGTTAT GTCACATTCT AAATTGATAG GAGGGTTTGA 
CCATATATAA GACAAAAACA CCCGACTAGT GCTTTATTTT GCTGATTCAT 
TGTTAAAATT GCCTCTATGA AACAAAAACA CCCAACCAGT GCTTTACTTT 
GCTGATTCAT TGTTAAAATT GACCCTATGG AACAAAAACA CCCAACCAGT 
GCTTTACTCT GCTGATTCAT TGTTAAAATT GCCCCTATGA ACTGAGGATT 
GGTCTGGTTC TCTATCCTGC CAAAAATGTG GTAAATCCTG AAATCTTTGG 
AGTTGCTAAA TTTGGGCAGG GTAGAGATGT CCCATTTGGT GTCAAGATTG 
AGCTGTGAGA ATAGATGGGG ATAGCTGAAC TTTTGGTGTG GAAACATTAT 
TAAATTATTG TCGGATAGTG AATTGGAATT GCTAGCTGCT TTCATACAAA 
ACCGGCCACT TATCTTATGC TTTTGTGTTC TGCAGGCGTT GGACAAGATC 
AGGTTCGAGA GCTTGACGGA CAAGAGCAAG CTGGATGCTC AGCCAGAGCT 
GTTCATCCAT ATTGTTCCTG ACAAGGCCTC CAACACACTG TCGATCATTG 
ACAGTGGTAT TGGTATGACC AAGTCAGATC TTGTGAACAA CCTGGGTACC 
ATTGCCAGGT CAGGGACTAA GGAGTTTATG GAGGCACTGG CTGCTGGTGC 
TGATGTGTCC ATGATTGGTC AGTTCGGTGT TGGATTCTAC TCTGCCTACC 
TTGTTGCCGA GAGAGTAGTT GTGACCACCA AGCACAACGA TGACGAGCAG 
TATGTGTGGG AGTCTCAGGC TGGTGGGTCC TTCACTGTCA CACGTGACAC 
ATCTGGGGAG CAGCTTGGGA GGGGTACTAA GATCACCCTC TACCTCAAGG 
ATGATCAGTT GGAATACCTT GAAGAGCGCC GCCTCAAGGA CCTGATCAAG 
AAGCACTCTG AGTTTATCAG CTACCCTATC TCTCTATGGA CTGAGAAGAC 
CACTGAGAAG GAAATTTCTG GTGATGAAGA TGAGGAAGAG AAGAAGGATG 
CTGAGGAGGG CAAGGTTGAG GATGTTGATG AAGAGAAGGA AGAAAAGGAG 
AAGAAAAAGA AGAAGATCAA GGAGGTTTCT CATGAGTGGT CCCTGGTCAA 
CAAACAGAAG CCTATCTGGA TGAGGAAGCC TGAGGAGATC ACTAAGGAGG 
AGTATGCTGC TTTCTACAAG TCCCTGACAA ACGACTGGGA GGAGCATCTT 
GCTGTCAAGC ACTTCTCTGT GGAGGGTCAG CTGGAATTCA AAGCTGTTCT 
CTTTGTTCCC AAGAGGGCAC CATTCGACCT CTTTGATACG AGGAAGAAGC 
TCAACAACAT CAAGCTCTAC GTCCGCCGAG TCTTCATCAT GGACAACTGT 
GAGGAGCTGA TCCCTGAGTG GCTGAGCTTT GTCAAGGGCA TTGTTGACTC 
CGAGGATCTT CCCCTCAACA TCTCCCGTGA GATGCTGCAG CAGAACAAGA 
TTCTCAAGGT CATCAGGAAG AACCTTGTCA AGAAGTGCGT TGAGCTCTTC 
TTCGAGATTG CTGAGAACAA GGAAGACTAC AACAAGTTCT ATGAAGCCTT 
CTCCAAGAAC CTCAAGCTCG GTATCCACGA GGACTCCACC AACAGAAACA 
AGATTGCCGA GCTCCTGAGG TACCACTCCA CCAAGAGCGG CGATGAGCTG 
ACCAGCCTCA AGGATTACGT GACGAGGATG AAGGAAGGCC AGAACGACAT 
ATACTACATC ACCGGCGAGA GCAAGAAGGC CGTGGAGAAC TCCCCCTTCT 
TGGAGAAGCT GAAGAAGAAG GGTTACGAGG TCCTCTACAT GGTTGATGCC 
ATCGGCGAGT ATGCTGTTGG CCAGCTCAAG GAGTTTGAGG GCAAGAAGCT 
CGTCTCTGCC ACCAAGGAGG GACTCAAGCT TGATGAGAGC GAGGACGAGA 
AGAAGCGGAA GGAGGAGCTC AAGGAGAAAT TCGAGGGTCT CTGCAAGGTC 
ATCAAGGAGG TGCTCGGAGA CAAGGTCGAG AAGGTGGTGG TCTCGGACCG 
TGTGGTGGAC TCCCCGTGCT GCCTCGTCAC CGGCGAGTAT GGCTGGACGG 
CCAACATGGA GAGGATCATG AAGGCCCAGG CGCTGAGGGA CTCGAGCATG 
GCCGGGTACA TGTCGAGCAA GAAGACGGTG GAGATCAACC CGGAGAACGC 
CATCATGGAG GAGCTCCGCA AGCGCGCCGA CGCCGACAAG AACGACAAGT 
CCGTCAAGGA CCTCGTCTTG CTCCTCTTCG AGACGGCCCT CCTCACCTCC 
GGCTTCAGCC TCGACGACCC CAACACCTTC GGCAGCAGGA TCCACCGCAT 
GCTCAAGCTC GGCCTGAGCA TCGACGAGGA CGAGACGGCG GAGGCCGACA 
CCGACATGCC GCCGCTCGAG GACGACGCCG GCGAGAGCAA GATGGAGGAG 
GTCGACTAAG CGGGTTTCCT TTTTTTTCCC CTCGTCAAAT CCTTCGCAGC 
GAAAGTACAC CATGGAGCAT TGGAGCTAGC TTATCTGTTT TACCTTTTGA 
ACATCGCGTT GTTGGGTCGG TTCGGTTTAT TTTGTGCGAT TTGCTTTACC 
TTTACCTAGC CTGCAATGCA TGGGGCTAGA TTGTGCTATG GGTTCTCGAA 
CTGCGTACGT TAATTATATT GCTAAATATG AGTATTATAT TAGTGTCCG

Gene models with high sequence identity

AT5G56030.2 [+] show detail - heat shock protein 81-2
E-value: 0; Score: 983.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	ATPase-like, ATP-binding domain	1.9e-64
FPrintScan	Heat shock protein Hsp90, N-terminal	1.5e-55
FPrintScan	Heat shock protein Hsp90, N-terminal	1.5e-55
FPrintScan	Heat shock protein Hsp90, N-terminal	1.5e-55
FPrintScan	Heat shock protein Hsp90, N-terminal	1.5e-55
FPrintScan	Heat shock protein Hsp90, N-terminal	1.5e-55
HMMPfam	Heat shock protein Hsp90, C-terminal	3.7e-264
HMMPfam	ATPase-like, ATP-binding domain	6.7e-09
HMMPIR	Chaperone protein htpG	0
Coil	coiled-coil	0
Coil	coiled-coil	0
HAMAP	Chaperone protein htpG	24.289
HMMPanther	gb def: Gravity specific protein GSC 381 (Fra	2.7e-08
HMMPanther	Chaperone protein htpG	2.7e-08
HMMPanther	Chaperone protein htpG	0
superfamily	Ribosomal protein S5 domain 2-type fold	1.2e-111
superfamily	ATPase-like, ATP-binding domain	7.6e-56
superfamily	HSP90 C-terminal domain (C-terminal part of P	2.5e-41

See the detailed result >

AT5G56030.2

Model type: Protein coding
Short Description: heat shock protein 81-2
Curator Summary: A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.
Computational Description: heat shock protein 81-2 (HSP81-2); CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: HEAT SHOCK PROTEIN 81.4 (TAIR:AT5G56000.1).
Link: InterPro Scan - TAIR