K13031

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13031

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13031

Determination of introduced cDNA(s)

  • J033079G16 - Rice Full-length cDNAs - Original: J033079G16

    full reading [+] show sequence

    Nucleotide sequence: J033079G16 - full reading 
    GGAGTGCTCC AGTAGGGTTT TGTTTAGTTT TCACTTTACC TTTTCCCGCA 
    CGGCGACGAA GAGGAGGAAG GAGCGGCGCC ACCACCACCA CCACCACCCC 
    ACGCCATGGC GAACCCAGCG CAGGGGCCTC TGAGAGCGAG GACGAAGCCC 
    GCGGGGAGGA GGGGCGGCGC TCCGCCGCCC GCCGCGGAGG ATCCGTCCCG 
    GGCGGCGGCG GCGGCGGCGA GGCGCTCGGT GCGGAAGTGG AGCACGTGGA 
    CGATGAAGAC GGCGAAGGTG GCGGCGTACT ACGGCTTCAT CCCCCTCGTC 
    ATCGTCATCG GCATGAACTC CGACCCCAGC CCTCCATCGG ACAGCTCCTC 
    TCCCCGCTGT GATTCCGCTT CGACCCCCAC TCGACTCTGC CTCCGCTTTT 
    CTTGGGCTCT GCTACATGAT CGTACTTACT GCGTAGTTGA TCTGCAATTA 
    GTACTATTTT GCTACTAGTA TATTCGCTAT GTGTTAGCAA TATTCTGCAC 
    TGTTAATTTG CTGGGAACTG GGAAGTTAGT ACTTGCATCG ATCGTCATGT 
    AACCTTTGTG ATGAATTTGG TGATGCCTGC GTTTGATTCT GATGCGTGCC 
    AGGCATGTCG AATACCATGG TTCGGTGCTT GCCTTGCGAG ATGCCTCTTG 
    ATCTATTATT GTGTGGACCT TGTTCAGGAG AGTGTTTTTG GCCAATAGCT 
    TTGAGCAATT CAAGGGAGTT TCAGTCTTCT TCTGGGTGCC TGTTTAGGCT 
    GGAAATTCCA AAGATGAATA CCTGTTTTCT TTACTGTATC TTGAATTCCA 
    GTTCTTGTTG GC

    Gene models with high sequence identity

    1. AT5G41685.1 [+] show detail - Mitochondrial outer membrane translocase complex, subunit Tom7
      E-value: 7e-06; Score: 48.10

     

    InterPro Scan Digest

    See the detailed result >

    AT5G41685.1

    Model type
    Protein coding
    Short Description
    Mitochondrial outer membrane translocase complex, subunit Tom7
    Computational Description
    Mitochondrial outer membrane translocase complex, subunit Tom7; FUNCTIONS IN: protein transporter activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity; INVOLVED IN: intracellular protein transport; LOCATED IN: mitochondrial outer membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial outer membrane translocase complex, subunit Tom7 (InterPro:IPR012621); BEST Arabidopsis thaliana protein match is: translocase of outer membrane 7 kDa subunit 2 (TAIR:AT1G64220.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR