K14338

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14338

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14338

Determination of introduced cDNA(s)

  • J033097A05 - Rice Full-length cDNAs - Original: J033097A05

    full reading [+] show sequence

    Nucleotide sequence: J033097A05 - full reading
    GAGTGCAGTG CAGTGCCTCT GAGGTCTCTC TCTCTCTCTC ACACACACAC 
    ACGTCCTCTG GTCACCGACG CTCCTCCTAC TACTAGTACA GTGTGATCGA
    GCCCCTCCTC ACTTACCTTC GCCGAAGATC CATGGCGGAG GACTAAGCTC
    CGGCTGCTGA TTTCTTCGCT TTGGACGCCC GCAAAAGTTA CTGCTGCTAC
    TGCCGGTACC GGCTGCCGAG GAGGGGAATG AGGATGAAGA CGCTGGCGTG
    CTGCCGGCGG CGGCCGCAGG ACTTCAGCAT CGACATGGAC CAGGAGCCTG
    ACAGGGTGAT GACGTACAAT GGCCTTGAGA GCTGTATTAT CAACAGTTCC
    TCTTATGACG ATGATAGTGG CCTTAGTGCA ACAACGGGAG CAGATGGGTG
    TGTAACCACT GATTCCGTTG ATGATGAAGT CTCAAGTTGC TCCTCAAGTA
    AAGATGTTTC TAGCTCTTCG TTCTCTTCAC AATGCCATCC ACTGAGAAAG
    CAAGAGGAGC ATTCACTTTA CGAGTTGGAT ACACTCAGTG CTGTCCATCT
    ACTTCCTCTC AAAGGGAAGA AGCCAATCAC GTATACCTTG AGTGCTTCAG
    ACATTGAAAC CATGAAGGAG AAGTTTGGGA AGCTACTGCT TGGTGATGAT
    GCTTCAGGAG GAGCTAGAGG TGTTTGTGCT GCTCTGGCTT TGTCCAATGC
    CATTATTAAT CTCTCAGCCA CTATATTTGG AGAACTCTGG AAGCTGGAAC
    CACTCTGTGA AGAGAAAAAA GTCAGGTGGC GGAAGGAAAT GGACTGGTTG
    CTTTCTCCTA CAACCTACAT GGTTGAGCTG GTTCCTACAA AACAAAATGG
    AGCAGACGGG TGCACGTTTG AGATTATGAC CCCGAAAGCA CGTTCAGATG
    TTAATGTGAA CCTTCCTGCC CTTCAGAAGC TTGATTCCAT GCTAATTGAA
    GTGCTGGACT CGATGGTAGA CACAGAGTAT TGGTATGTGG AGAGTGGTAG
    CCGAGCTAAT GGCCGGGGCA AAAAGAATGG TCTGAGGCAG ACGAAGAAGT
    GGTGGCTCCC ATCACCTCGT GTGCCAGATA TAGGGTTGTC TCAATTTCAG
    AGAAATAGGC TTGTTTTTCA GGCTAAGCTG GTTCATCAAA TCCTCAAAGC
    TGCGATGTCA ATCAATGAAG AAGTCCTGCT TCAGATACCT ATTCCTCCAG
    CTGTCACGGA TGCTCTTCCT AAGTCTGGCA GAGCTGGCTT GGGTGAAGAC
    TTGTACCATG CTATAACCAC AGAGTACATT CCCATAGAGG AAATTTTCCT
    CTCTCTTAGT TTAAAAACGG AGCATACCGT GCTCGAGACT ATGAACCGGT
    TGGAGGGTGC AGTTTTTGCA TGGAATCAAA GGATCTCAGA GGAAAAGAGC
    AAGAAATCCC CAGGAAGGCA TTCCTGGAAT TTCATGAAGG ATAGTTCATC
    AGAACTCGAT AAGATGTCCA TGTGCATAGA AAGGGTTGAA ACACTTATGC
    AGCTTCTGAA ATCCAGATTC CCGAGCCTTC CTCCAACTTT TATAGAAGTT
    GTAAAGATCC AATACAATGT GGACGTGGGG CATGCCATTG TGGAGGCCTA
    CTCAAGGGTT CTTGTTGGGG TGGCATTCAG CATACTGTCC AGGGTAGCAG
    AGATTCTGCT GGAAGATGAC CTGATCAAGA AGCCCAACAC CCCTCTGGCC
    ACACTCAAGT TCGACCTCTC CTCCGACGTG TACCTCGCCG GCATCACCGA
    GACGCCGCCG GGCCACATCC GGCGGTCGCT GATGGACCAG ATCAGCCTGG
    TCGACGGCAG CCTCGACGCG GTCGTCAGGA AGAAGGGGGT GAAGCAGCTT
    AGGTGGTGAA AAAGGACATG AAGCTGTGAA GTTTTTCTTT TTGGCAGTTG
    TACAGGGTTT GTGATGATGA TGCATGCTGT GCTGCGCGCT GGCTGGCTAC
    ATAAAGTTGG TTAAGTTCAC CTTGCTAATA CGTCCTGTAT GGAACGGGCT
    AAATAGTGTA TGCATGGTAA AAGCTACTAG CATTGGCCGC ATCGTACATC
    AACGTTTGCA GCG

    Gene models with high sequence identity

    1. AT1G31650.1 [+] show detail - RHO guanyl-nucleotide exchange factor 14
      E-value: 4e-131; Score: 465.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Rop nucleotide exchanger, PRONE 3.8e-138
    ProfileScan Rop nucleotide exchanger, PRONE 98.521

    See the detailed result >

    AT1G31650.1

    Model type
    Protein coding
    Short Description
    RHO guanyl-nucleotide exchange factor 14
    Curator Summary
    Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
    Computational Description
    RHO guanyl-nucleotide exchange factor 14 (ROPGEF14); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 7 (TAIR:AT5G02010.1); Has 302 Blast hits to 301 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR