K14445

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14445

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14445

Determination of introduced cDNA(s)

J033086N13 - Rice Full-length cDNAs - Original: J033086N13

full reading [+] show sequence

GACTCACCAC GCTCTCCACT ACACGACTCG TCGCCGTCTT GCTCTGCTGC 
CTCTCGCGCC CGCGCAGCAG TGAGCAGCAG CAAGAGCAGC AAAATGGCTC 
TACCCGGGCG CCTCCGCGCC CTCATCCTCG CCGTCGCATT GCCGCTGCTC 
TTCCTGTCCG CTTCAGAGGC GGGCACGGTG GGGATCAACT ATGGGAGGGT 
GGCGAACGAC CTGCCCAACC CGGCGGCGGT GGTGCAGCTG ATGAAGCAGC 
AGGGCATCGC GCAGGTGAAG CTGTACGACA CCGAGCCGAC CGTGCTGCGG 
ACGCTGGCCA ACACCGGCAT CAAGGTGGTG GTCGCGCTGC CCAACGAGCA 
GCTGCTCGCC GCGGCGTCGC GCCCGTCGTA CGCGCTCGCC TGGGTGCGCC 
GCAACGTCGC AGCGTACTAC CCGGCCACGC AGATCCAGGG CATCGCCGTC 
GGGAACGAGG TGTTCGCCTC GGCCAAGAAC CTCACGGCGC AGCTCGTCCC 
GGCGATGACC AACGTGCACG CCGCGCTGGC GAGGCTCAGC CTTGACAAGC 
CCGTCAAGGT GTCGTCCCCC ATCGCGCTCA CCGCGCTCGC CGGCTCGTAC 
CCGCCGTCGG CCGGCGTGTT CCGGGAGGAC CTCGCCCAGG CGGTCATGAA 
GCCCATGCTC GACTTCCTCG CGCAGACCGG CTCGTACCTC ATGGTGAACG 
CGTACCCGTT CTTCGCGTAC TCTGGCAATG CCGACGTCAT CTGCCTCGAC 
TACGCGCTGT TCCGCCCCAA CGCCGGCGTG CTCGACTCCG GGAGCGGCCT 
CAAGTACTAC AGCCTCCTCG ACGCCCAGCT CGACGCCGTG TTCACCGCGG 
TGAGCAAGCT TGGGAACTAC AATGCCGTGC GCGTCGTGGT GTCGGAGACC 
GGGTGGCCGT CCAAGGGTGA CGCCAAGGAG ACCGGCGCCG CGGCGGCCAA 
CGCCGCGGCC TACAACGGCA ACCTGGTGCG CCGCGTCCTC TCCGGCAACG 
CCGGAACGCC GCGCCGCCCC GACGCCGACA TGGACGTGTA CCTCTTCGCT 
CTCTTCAACG AGAACCAGAA GCCCGGACCG ACCTCCGAGC GCAACTACGG 
CGTGTTCTAC CCGAACCAGC AGAAGGTCTA CGACGTCGAG TTCGTCCTCG 
GCGGCAACTC CGCTGGCGGC GGCGGCAGCA GCGGCAAGGA CAACGGCGGG 
CTCGGCTGGC AGGACAACGG CGGGGTAAAC GCCGGCAATG CGCCGGCCGG 
CGCAGGCGGC GGCGTGAAGG CGACGTCGAC CGGTGAGGCG TGGTGCGTGG 
CGAACGCCAT GGCCGGGGAG GAGCGGCTGC AGAAGGCGCT GGACTACGCG 
TGCGGGCCGG GCGGCGCGGA CTGCAAGGCC ATCCAGCCCG GCGCGGCGTG 
CTTCGAGCCG AACACCATGG TCGCCCACGC CTCCTACGCC TTCAACGACT 
ACTACCAGCG AAAGGGCCGC ACCATTGGCA CCTGCGACTT CGCCGGCGCC 
GCCTACGTCG TCAACCAAGC GCCAAAGATG GGCAAGTGTG AGCTCCCGTC 
GACGGTCTGA ACCGAAGCAA CAGTAGCGAA AGACTGAAGA AGAGCAGCGG 
CAGCAGCCAT CTCGGGATGC GAGGATTTAT GAAAGAAAAT CGAACGCCGG 
ACAGAGGAAG GAGGGAAAAG AGGCAGAGAT GTTGGAATCT TTGCTTTTCT 
TTTCCAGTTT TCCTCCCTTT CTTTACCTGT GGTGCTGTGC CCGCTGCTTG 
ACTCCTGCTG CATGTTTGCT GCGGCGTAGA AACAGATTAC TGTAGTAGCT 
GTACCTCTTT CTTTTTGCAG CTTTGGCTAA TGGTGGGGGA TATCTTTGTT 
TAGTCCATGT AACTACGCTG GAGTATGGAG TATTACTATA TGATTAACCT 
AAATCACTAC TATTATAGAC TG

Gene models with high sequence identity

AT5G55180.1 [+] show detail - O-Glycosyl hydrolases family 17 protein
E-value: 1e-148; Score: 524.00

InterPro Scan Digest

Program	Description	E-value
HMMSmart	X8	1.7e-48
superfamily	Glycoside hydrolase, catalytic core	3.3e-105
HMMPfam	Glycoside hydrolase, family 17	2.2e-100
HMMPfam	X8	8.8e-31
Gene3D	Glycoside hydrolase, subgroup, catalytic core	1.8e-110
PatternScan	Glycoside hydrolase, family 17	0

See the detailed result >

AT5G55180.1

Model type: Protein coding
Short Description: O-Glycosyl hydrolases family 17 protein
Computational Description: O-Glycosyl hydrolases family 17 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, family 17 (InterPro:IPR000490), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: O-Glycosyl hydrolases family 17 protein (TAIR:AT4G26830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR