K14501

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14501

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14501

Determination of introduced cDNA(s)

  • J033028K22 - Rice Full-length cDNAs - Original: J033028K22

    full reading [+] show sequence

    Nucleotide sequence: J033028K22 - full reading 
    GATCATCAAA CGAGACAAGA GTCACAGTTC GAGTCAGAGC TATCTAACCA 
    ATCCATCCAT CGAGCAATTG TTGATCCGTC TGTGAATTGT GATGGCGGCG 
    GCGGAGGGGG AGCAGGGGAA GACGGTGGTG GTGGTCGGGG TGGACGACAG 
    CGAGCACAGC AACTACGCGC TGGAGTGGAC GATGCAGCAC CTGGCGAGCG 
    GCATGGCGGG CAGCGGCGGC GCCGAGCTCG TCATCGTCCA CGCCAAGCCC 
    TCGCCGTCCT CCGTCGTCGG CTTCGGCGCC GGCCCCGGTA CATCACCCGC 
    CTCCTTGAAT TGATCTCGAT GAAATTTATT CTGAGCTGAC TCGTTGATGG 
    CGTCAGGGTC TGGAGAGGTG GTGAGATACG TGGAGGCCGA CCTGCGCAAG 
    ACGGCGGAGG ATGTCGTCGA GAAGGCGCGC CGCCTCTGCA TCGCCAACGC 
    GGTAATCGAT CGATCAAACT CTCTCACTCT CGCAGATTCT GCAGATTTCC 
    GCACAGGGTT TCTGTGGCTA AACGGGCACC TGATTATTGG CATTATTGAT 
    GCATTTGGTT GCAGATGCAC GCGTTGATCG AGGTGATCGA AGGGGAGCCC 
    AGGTACGTGC TGTGCAACGC GGTGGAGAAG CACAGCGCGG GGTTGCTCGT 
    CGTCGGCAGC CATGGCTACG GCGCAATCAA GAGGGCCTTC CTGGGGAGCG 
    TCAGCGACTA CTGCGCCCAC CACGCGCACT GCTCCGTCAT GATCGTCAAG 
    CAACCCAAGG CCAAGCGCTC TCGTGCCGAG ACCGCGTGAA AAACACCAAA 
    TTTCGGGTGT GAGCTGAGCC GAGCAATGTG TGTGTGGTTC GCTTGGGTAG 
    CAGCAGCTTC TTGCGTTCTG TACATGGGAT GATTTGTATG TGTTAGTTTC 
    ATAGGTTTTA TCAGTTTATG TATCGAAATG TTTGTGC

    Gene models with high sequence identity

    1. AT2G47710.1 [+] show detail - Adenine nucleotide alpha hydrolases-like superfamily protein
      E-value: 3e-42; Score: 83.20

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Rossmann-like alpha/beta/alpha sandwich fold 5.2e-16
    HMMPfam UspA 1.2e-18
    HMMPfam UspA 2.3e-06
    superfamily Adenine nucleotide alpha hydrolases-like 3.5e-17
    FPrintScan Universal stress protein A 2.4e-10
    FPrintScan Universal stress protein A 2.4e-10

    See the detailed result >

    AT2G47710.1

    Model type
    Protein coding
    Short Description
    Adenine nucleotide alpha hydrolases-like superfamily protein
    Computational Description
    Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G49050.1); Has 2830 Blast hits to 2747 proteins in 619 species: Archae - 112; Bacteria - 1833; Metazoa - 129; Fungi - 32; Plants - 667; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR