K14722

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14722

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14722

Determination of introduced cDNA(s)

  • J033135K13 - Rice Full-length cDNAs - Original: J033135K13

    full reading [+] show sequence

    Nucleotide sequence: J033135K13 - full reading 
    GATCCATCCG CCGCGCCTCT CTCTCCTTCA TCATCAATTC CGGTGAGGAT 
    ATCGCCGGAT CGACGCGCCG CCGGCGGGAG CCAGCCGCAG AGTGGAGCTT 
    GGAATAGGCA GCTTTCTACT GTGAATCAAA AGCGTGATGA ACAAAGATAA 
    AGTTCATGAC AAGGAGACTC ACAGAACGAG CAACGATATA AGTCATAAAA 
    CATCTGTGGA CAAGGTTAAG GCCCCCAATC TGTTTGAACG AGCCAAGGAA 
    GAGGTTGAGG CTCTCGTTGG AGCTGTTCAT GATAAGATGG AGCACAATTC 
    CAGTCCCCAT GGAAATAATG CTGACCTGCA TAAGGACTCA AAGGATGAAA 
    GCAAGGTGTC AATGAACAAA ATAGAGACCC ACAAGAATGA AACTCATGGT 
    ACAAGCGATG ATATAAATGA GAATACACCA GTTGAGAGAG TTAAAGGTCC 
    AAATGTGTTT GAGCGTGCCA AGGAAGAGAT TGAAGCTATT GTTGAAGCCT 
    TCCACCCAAA GAAGGGATCT GACAAGTGAA GATTGAGATG TTCTGTTGCC 
    TCTGTCTGCA CTTGATGTGA AAACATTGAC ATGAGTTATT AATAGATCCA 
    TGGATGAGTT GTGAGATATC CATCGGCTGG TCTTATTATT GCCAAACTAT 
    GGAGTTGTAA CTGTTGAATG GTTCATTGTA CCACTGATAT ATATATGAGC 
    AGAGTGTGTA TCATGTGTGA CATGAAAGTA TTACTGTTCT TCAGTGTTTG 
    ATTTTAGTGT ATGTTGAACT TAGTCCTTTG CATGATATGG TATTTTACTT 
    GCTACCATAC ATGCAAAAAT CTTTTGAGGT GCATAAATAA AGAGAGAGTC 
    AATTGCTGTA CAATTTT

    Gene models with high sequence identity

    1. AT5G57000.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-23; Score: 106.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G57000.2

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 141 Blast hits to 104 proteins in 24 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 8; Plants - 82; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR