K15218

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15218

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15218

Determination of introduced cDNA(s)

  • J013111O16 - Rice Full-length cDNAs - Original: J013111O16

    full reading [+] show sequence

    Nucleotide sequence: J013111O16 - full reading 
    GGTTGGAAAT TCCGCGCGGT CAAACGAAGC GAGAGAAAAA AAAATTTCTT 
    AAAAACAAGA CAAAAAAAAA AAAAATCCTC GAGACACCGA GCGAGTGAGC 
    GAGCGGCGGC GAGGCGGCCA CCGACGACGA CCGCCGGAGC CGGAGCCCGG 
    CGGAGATGGA GATGGAGTCC AAGTACGCGG CGCTGCGGCG CGCGGCGGAG 
    GAGGCGGCGG CGGTGGACGC GCACGCGCAC AACCTCGTCG CCGACGGCTC 
    CGCGTTCCCC TTCCTCCGCT GCTTCTCCGA GGCCGACGCC GCCGACGCCC 
    TCGCCCTCGC TCCCCACACC CTCTCCTTCA AGAGAAGCCT GAGGGACATC 
    GCTGCATTGT ACAACTGTGA AGCTTCACTT GAGAAGGTGG AGGAGTTCAG 
    AAGGGCTGAA GGGTTGTCGT CTATAAGCTC AAAGTGCTTC AAGGCTGCCA 
    ACTTATCTGC AATTCTTATA GATGATGGCA TAGACTTTGA CAAGATGCTT 
    GAACTGGAGG CACACAAGGC GTTTGCTCCT ACAGTTGGCA GAATTCTGAG 
    GATTGAAAAG CTGGCAGAAA CAATTATTAA TGATGAATCA TTCAGCGCAT 
    CAAGCTGGAC ACTTGACTCT TTTACTGAAA TTTTTGTCAC TAAGCTGAAA 
    TCAGTTGCCA ACAAAATTGT TGGATTGAAA AGTATAGCTG CATATAGAAG 
    TGGCTTAGAG ATTGATCCAA ATATTAGCAA GACAGATGCA GAGGATGGAC 
    TACGTAAGGA GTTATCAGGT CAGAGGCCTC TTCGGATTAC AAATAAGAAC 
    CTGATTGACT ATCTATTTAC TTGCAGTCTT GAAATTGCTG TATCATATCA 
    CCTGCCAATG CAGATTCACA CAGGATTTGG AGATAAGGAC CTGGACTTGC 
    GAAAGTGCAA CCCTCTCCAT CTGCGTGCTG TTCTTGAGGA CACAAGATTC 
    TCTAAGTGCC AAATTGTTCT TTTACATGCC TCTTATCCAT TTTCAAAGGA 
    AGCATCATAT CTAGCATCAG TGTACTCCCA GGTATACCTT GATTTTGGCT 
    TGGCAATTCC AAAACTTAGT GTTCAAGGAA TGACATCATC AATTAAAGAG 
    CTCCTTGAGC TAGCTCCCAT AAAGAAGGTC ATGTTCAGCA CAGATGGTTA 
    TGCTTTTCCA GAGACATATT ACCTAGGTGC AAGGAGGGCA CGTGATGTTG 
    TTTATCGTGT ACTCTCAGCT GCATGTGAAG ATGGTGACCT TAGCATTCAA 
    GAAGCTATTG AAGCAGTTGA GGACATATTT AGACGAAATG CATTGTATCT 
    ATACAAGTTG AATGTTGCCA ACGGGTCAGT CGGTCAGATA ACAGCAATAG 
    CTGACAACGG CATACCATTA TCTGAACAAG ATGTGCTCTT TGTTCGAGTC 
    GTCTGGATTG ATACTTCAGG TCAACATAGG TGCCGCGTTG TGCCAGCCGG 
    AAGATTTTAT GAAATTGCTA GGAAAAAGGG TATTGGTCTG ACTTTTGCAT 
    CGATGGGAAT GACTTCATTT ACTGATGGCC CAGCAGATGG AACAAACCTT 
    ACTGGTGTAG GAGAGATCAG GCTTATGCCG GATATGTCAA CACTATTGAG 
    GCTTCCATGG TAAACTTGAT TTTTTATGTA TATTTCAATG ATACTCTTTT 
    CAAGTAGGCC ACCTGTTCAC CCATTATGAC ACTTTTTATT TTCATCCTTG 
    TTAGTGTTTA CTAAAGTTTA CTTAATTATG GCAGCATTAG TTCTTAATTG 
    AATAATGTCA CTTCTGAACA TCATATAATG GTGGATTGCT GTTTGTGCAA 
    GGTCAAGACG CGAAGAAATG GTAATGGCTG AAATGCATAT AAGGCCTGGG 
    GAAGCCTGGG AATACTGTCC CAGAAATACC TTGGGAAAAG TCACAAAAGT 
    TCTGCTAGAT GAGTTTAATG TGACAATGAT GGCAGGTTTT GAGAATGAAT 
    TTTTCCTACG TAAAAAAGTA GTAAGTGGTG AAAAGGAGCT GTGGGTCCCA 
    TTTGACAATA CCCCCTACTG CTCAACTACA GCATTCGATG GTGCATCATC 
    TGTGTTGCAA GAAGTATATA CTTCTCTTAA AGCGGCGGAA ATTGTGGTTG 
    AGCAGCTGCA TGCTGAATCT GGAAAAGGGC AGTTTGAGAT AGCCTTGAAG 
    TATGTGTTGT GCACTCTTGC TGCTGACAAA CTGATATATG CCCGTGAGAT 
    TATTAAATCA GTTGCTCGAA AGCATGGGCT ACTTGCAACT TTTCTTCCAA 
    AACCTGACTT GAATGATATT GGATCCGGTT CTCATGTGCA TCTGAGTTTA 
    TGGGAATTCG ATCAGAATGT GTTCATGGGA TCAAGTGAAT ATAATTACTA 
    TGGAATGTCA AGAATCGGAG AAAGCTTCCT TGCTGGAGTA TATCTCCATC 
    TTCCATCAAT CTTGGCATTC ACTGCTCCTC ACCCAAACAG CTACAACCGA 
    ATTCAGCCAA ACACATGGAG TGGTGCATAT CAGTGCTGGG GGAAGGAGAA 
    CAGGGAGGCT CCACTGAGAA CTGCATGCCC ACCTGGGATA CCTCTTGATC 
    TCGTCAGCAA CTTCGAAATT AAATCCTTCG ATGCGTGCGC AAACCCGCAC 
    TTGGGCCTTG CTGCTATAGT TGCTGCTGGG ATTGATGGAC TCAGGAGAAG 
    CCTTACGTTG CCTGAACCAA CTGAATCAAA CCCTGCAGGT TATGCCTCCA 
    ACTCCAAGCT CAAAAGGATG CCGAAGGACT TGATGGAATC TGTCGAAGCA 
    CTAGCTGCAG ACAAAATCAT GCATGAATTG ATCGGCGATA AACTTGTCAC 
    TGCCGTTATT GCTGTACGAA AGGCTGAGAT CGATCACTAC GAGAAGAACC 
    CTGCAGCATT CGCCGATCTC ATTCACCGTT ACTAGGGTGA AACACTAGTT 
    AGTTCCACGG AGCAAAGAGG ATTACGAGTG AATTACTACG ACCCACGAAA 
    TTGCTTATTC TCGCGTCCTT TTCCGCTGTA CTTGCAGTTG CAGTAATTTT 
    TTTTTGATTG AATAACTGGT TTTAGGTTTC CAAAAAAAGG GCACTTGGCA 
    AACTCATCCT TCTAGAGAAA ATAAAGCAAT TCACCAATCA GGTTCTCGGC 
    CGCTTC

    Gene models with high sequence identity

    1. AT3G53180.1 [+] show detail - glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases
      E-value: 4e-152; Score: 536.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Glutamine synthetase/guanido kinase, catalytic domain 2e-80
    HMMPanther NODULIN / GLUTAMATE-AMMONIA LIGASE-LIKE PROTE 1.4e-146
    HMMPanther GLUTAMINE SYNTHETASE 1.4e-146
    HMMPanther NODULIN 6L 7.5e-175
    HMMPanther GLUTAMINE SYNTHETASE 7.5e-175
    superfamily Metallo-dependent hydrolases 2.7e-12
    superfamily Glutamine synthetase, beta-Grasp 1.4e-06
    superfamily Glutamine synthetase/guanido kinase 1.1e-82
    HMMPfam Amidohydrolase 2 1.1e-26
    HMMPfam Glutamine synthetase, catalytic domain 1.4e-66

    See the detailed result >

    AT3G53180.1

    Model type
    Protein coding
    Short Description
    glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases
    Computational Description
    glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR