K15525

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15525

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15525

Determination of introduced cDNA(s)

  • J033138G03 - Rice Full-length cDNAs - Original: J033138G03

    full reading [+] show sequence

    Nucleotide sequence: J033138G03 - full reading 
    GCCTGCGAAC TCTGACCGCG AGCAGCCATG GAGTTATCCA TTGCGCCTGC 
    GGCGATGGCG ATGGCGATGG GCCTCCTCGC GAAGAACCCC AAGATGATCA 
    ATCACAGATA TGCCAGTGAC ATGCAACTGC AGCATCGCCT ATCTCCAGCT 
    TGTTCGGTGA TGTTCAACAA GCAGTGTTCA TACCGAATCA CCCGTAAAGC 
    TTGCAGTGTT CTTGGGGCAG TATCTCCGAT ACAATGTACA GAAACCAGCA 
    CAGAGTCTTT AGTATCTTTC AAAGATTTTC TTGTGTCTGT GCAAACTGAA 
    GAGGATGGAC TGATAAAGCT ACGAGTAACT GTAGCTGATA CAATGACAGA 
    ATCTATCTTT GAGAAAGTTT TCTCAAAGAA TGTTGCTGCT GCACAACCAC 
    TTCCTGGCTT TCGACGAATG AAAGGAGGGA AAACTCGAGA TATACCAAAA 
    GAGATTGCTC TGCACTTAAT TGGGCCATCA AAGGTGAAGA AAGAAACCAT 
    CAAGAATATC ATCAGCCTCA CAATTGCCGA ATATGTCCAA AAGGAGGACC 
    TCGATGCATC AAGAAATCTG AAGGTTCTAC AGACCTATGA GGAGCTTGAA 
    GCAGCATTCG AACCTGGAAA AGAGTTTTGC TTTGATGCAA CTTTTCATTT 
    ACAGTAGGTT AATGCAGTTA AGGACTCGGG ATTTAGATAG CCATTAGAGA 
    TGACCCCTGC AACCAAAGGG GCTTCCAGTT CCAGCTGATG ATTAATAGCA 
    CAACCTACAG ATAAACTTAT TATCTAGACA ATGATGCATA CGAACACTTG 
    TTAGTCAGTA CAAAGTGAAA TTATGTTGCC TGGCTATCTG TATTCTTGTA 
    AAAACAACAT GTTTTTAGAT TAGCAAATTT TCTTGCAGTC CTCGTTAAGA 
    TGGCCGTGTG CACCTTTGCA TGTAGAGGCC GGGGGATTAT AAGTTTTCCA 
    TTATTATAAA GAGGAACTTT CTTCC

    Gene models with high sequence identity

    1. AT2G30695.2 [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATE...
      E-value: 1e-33; Score: 140.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G30695.2

    Model type
    Protein coding
    Computational Description
    FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein folding, protein transport; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trigger factor, ribosome-binding, bacterial (InterPro:IPR008881); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR