K15737

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15737

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15737

Determination of introduced cDNA(s)

  • J013032K11 - Rice Full-length cDNAs - Original: J013032K11

    full reading [+] show sequence

    Nucleotide sequence: J013032K11 - full reading 
    GTGCTCGTAC TTCTTCACGA TCCCCTCACA CTTGTCAAAG CTCACCACCT 
    CAACCTCAGA GGGATCTGCC AAGCAACTGC ATACTTCACC AAGGTTAAAT 
    TTGCCTGGAA ATTTTATGAA AAGGCATCCA TTTGGTAGTA TCTGCGAAAT 
    ACGGCCTGTA GCCAGTCCTC CACCTCTCTT TCGCTGCCAT TCAAACTGTG 
    GGCTTGAAAT ATTGGCTTTC AGCCGCACAA ACTGCCCAAC ACAGTAGGCT 
    TCAGCCATTT GAAGGTCAGA GTATTCACCC TTCCAGAGGG TGTCCACTCC 
    AATCAGACCT ACATAAACAG TACCACTACG GTCAATGCTA TGAAGAATTC 
    CAACCTGAGA TCGCTTCTTC TCATCCTCCC TAAGCCGTAC CCAGTCTCCA 
    GCAGCGAAAC CATAGGTTAC CCTTTCCACT GTTGAAGAGC GAACCTTCAA 
    AGGATCATGT AAACCATGGA TCCTTACAAG AATGTAGCCA TCACGCTCTC 
    CATTATCCTC CATTCCAACT ATGGTTCCAT CAGGGACTTC CATGGTTGTT 
    GGACTACAAG TGTTTTTAAG CTTTCTCGAG CGAACCTTGT CTCCCACTTG 
    CAACTTGTCC TTGAAGAATG ACCAGTTAGT GCGGCTTGGC AGGGCTGGAC 
    TGACCATCCT TAGATTTTCA GAATTTCCCT GGTCAGTATT TTCGTAATCT 
    ACATCTTTTG CACTCTCAAA TGCATCTAAA ATATCAGTCA TCTGGGGGCG 
    GTCTCTAAAG TCATATTCAA AGCATCCAGA AAGGACATTC TCTATTGCTG 
    GAGGCAAATT GTATGG

    Gene models with high sequence identity

    1. AT4G32250.3 [+] show detail - Protein kinase superfamily protein
      E-value: 3e-79; Score: 291.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther PROTEIN KINASE 2.6e-105
    HMMPanther SERINE/THREONINE PROTEIN KINASE 2.6e-105

    See the detailed result >

    AT4G32250.3

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinases;ubiquitin-protein ligases (TAIR:AT5G13530.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR